Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.57■□□□□ 0.4
CLRN1P58418 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CLRN1P58418 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.57■□□□□ 0.4
CLRN1P58418 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 HLA-L-209ENST00000420110 1011 ntBASIC17.57■□□□□ 0.4
CLRN1P58418 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.57■□□□□ 0.4
CLRN1P58418 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.57■□□□□ 0.4
CLRN1P58418 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLRN1P58418 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.57■□□□□ 0.4
CLRN1P58418 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CLRN1P58418 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.56■□□□□ 0.4
CLRN1P58418 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 AC125437.2-201ENST00000625180 2167 ntBASIC17.56■□□□□ 0.4
CLRN1P58418 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLRN1P58418 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLRN1P58418 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLRN1P58418 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.56■□□□□ 0.4
CLRN1P58418 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 AC060766.5-201ENST00000590539 871 ntBASIC17.56■□□□□ 0.4
CLRN1P58418 AC083880.1-201ENST00000608266 535 ntBASIC17.56■□□□□ 0.4
CLRN1P58418 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLRN1P58418 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.56■□□□□ 0.4
CLRN1P58418 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.56■□□□□ 0.4
CLRN1P58418 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
CLRN1P58418 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLRN1P58418 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLRN1P58418 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
CLRN1P58418 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
CLRN1P58418 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.55■□□□□ 0.4
CLRN1P58418 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.55■□□□□ 0.4
CLRN1P58418 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.55■□□□□ 0.4
CLRN1P58418 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 PNMA6B-201ENST00000538162 1200 ntBASIC17.55■□□□□ 0.4
CLRN1P58418 AC142086.2-201ENST00000569753 217 ntBASIC17.55■□□□□ 0.4
CLRN1P58418 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 AC018553.1-201ENST00000616682 1458 ntBASIC17.55■□□□□ 0.4
CLRN1P58418 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLRN1P58418 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
CLRN1P58418 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CLRN1P58418 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLRN1P58418 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 AL158211.5-201ENST00000623583 2518 ntBASIC17.54■□□□□ 0.4
CLRN1P58418 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms