Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX16P57768 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SNX16P57768 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX16P57768 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.77■□□□□ 0.92
SNX16P57768 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SNX16P57768 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
SNX16P57768 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.77■□□□□ 0.92
SNX16P57768 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SNX16P57768 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SNX16P57768 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.77■□□□□ 0.92
SNX16P57768 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.77■□□□□ 0.92
SNX16P57768 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SNX16P57768 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.77■□□□□ 0.92
SNX16P57768 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX16P57768 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNX16P57768 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.77■□□□□ 0.91
SNX16P57768 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNX16P57768 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNX16P57768 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.76■□□□□ 0.91
SNX16P57768 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
SNX16P57768 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 AC008403.3-201ENST00000598924 454 ntBASIC20.76■□□□□ 0.91
SNX16P57768 AP006587.1-201ENST00000534129 1502 ntBASIC20.76■□□□□ 0.91
SNX16P57768 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
SNX16P57768 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SNX16P57768 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.76■□□□□ 0.91
SNX16P57768 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 AC124283.5-201ENST00000624661 1809 ntBASIC20.76■□□□□ 0.91
SNX16P57768 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SNX16P57768 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX16P57768 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.75■□□□□ 0.91
SNX16P57768 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 ESRRAP1-201ENST00000400596 1257 ntBASIC20.75■□□□□ 0.91
SNX16P57768 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SNX16P57768 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.75■□□□□ 0.91
SNX16P57768 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX16P57768 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.75■□□□□ 0.91
SNX16P57768 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNX16P57768 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SNX16P57768 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX16P57768 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SNX16P57768 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX16P57768 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SNX16P57768 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SNX16P57768 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX16P57768 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX16P57768 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX16P57768 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX16P57768 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX16P57768 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX16P57768 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms