Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 AC027612.3-201ENST00000413684 1047 ntBASIC17.09■□□□□ 0.33
CLDN12P56749 PGM5P4-201ENST00000421970 445 ntBASIC17.09■□□□□ 0.33
CLDN12P56749 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN12P56749 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN12P56749 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN12P56749 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN12P56749 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CLDN12P56749 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN12P56749 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN12P56749 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN12P56749 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN12P56749 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CLDN12P56749 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN12P56749 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN12P56749 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN12P56749 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN12P56749 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN12P56749 AC097381.1-201ENST00000429019 1296 ntBASIC17.08■□□□□ 0.32
CLDN12P56749 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN12P56749 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CLDN12P56749 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN12P56749 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN12P56749 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN12P56749 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN12P56749 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN12P56749 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN12P56749 TERF1P2-201ENST00000583350 1212 ntBASIC17.07■□□□□ 0.32
CLDN12P56749 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN12P56749 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN12P56749 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN12P56749 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN12P56749 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN12P56749 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 AC104581.1-202ENST00000635932 2618 ntBASIC17.06■□□□□ 0.32
CLDN12P56749 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 KRT8P17-201ENST00000453110 1448 ntBASIC17.06■□□□□ 0.32
CLDN12P56749 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN12P56749 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN12P56749 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN12P56749 SLC7A5P1-201ENST00000568957 537 ntBASIC17.06■□□□□ 0.32
CLDN12P56749 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN12P56749 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLDN12P56749 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN12P56749 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN12P56749 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms