Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN8P56748 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN8P56748 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN8P56748 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN8P56748 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLDN8P56748 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN8P56748 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN8P56748 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLDN8P56748 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN8P56748 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN8P56748 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN8P56748 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN8P56748 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN8P56748 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLDN8P56748 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN8P56748 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN8P56748 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 AC080038.1-201ENST00000611274 1154 ntBASIC18.69■□□□□ 0.58
CLDN8P56748 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN8P56748 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN8P56748 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN8P56748 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN8P56748 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLDN8P56748 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CLDN8P56748 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN8P56748 MKRN4P-201ENST00000444706 1521 ntBASIC18.69■□□□□ 0.58
CLDN8P56748 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN8P56748 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN8P56748 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN8P56748 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN8P56748 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLDN8P56748 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN8P56748 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN8P56748 AC073111.5-205ENST00000641717 521 ntBASIC18.68■□□□□ 0.58
CLDN8P56748 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN8P56748 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN8P56748 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN8P56748 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN8P56748 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN8P56748 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN8P56748 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN8P56748 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN8P56748 AF201337.1-201ENST00000520239 748 ntBASIC18.67■□□□□ 0.58
CLDN8P56748 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN8P56748 AC105036.2-201ENST00000569468 176 ntBASIC18.67■□□□□ 0.58
CLDN8P56748 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN8P56748 AL050303.2-201ENST00000619798 666 ntBASIC18.67■□□□□ 0.58
CLDN8P56748 AC092437.1-201ENST00000624794 1048 ntBASIC18.67■□□□□ 0.58
CLDN8P56748 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms