Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH11P55287 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH11P55287 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH11P55287 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.98■□□□□ 0.47
CDH11P55287 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH11P55287 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDH11P55287 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH11P55287 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH11P55287 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH11P55287 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.97■□□□□ 0.47
CDH11P55287 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.97■□□□□ 0.47
CDH11P55287 AL512625.2-201ENST00000417533 625 ntBASIC17.97■□□□□ 0.47
CDH11P55287 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH11P55287 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH11P55287 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH11P55287 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH11P55287 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH11P55287 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH11P55287 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH11P55287 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH11P55287 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH11P55287 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.96■□□□□ 0.47
CDH11P55287 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH11P55287 BX276092.2-201ENST00000417668 665 ntBASIC17.96■□□□□ 0.47
CDH11P55287 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 RARRES2P4-201ENST00000514074 484 ntBASIC17.96■□□□□ 0.47
CDH11P55287 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH11P55287 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH11P55287 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH11P55287 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH11P55287 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDH11P55287 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.96■□□□□ 0.46
CDH11P55287 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH11P55287 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDH11P55287 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.95■□□□□ 0.46
CDH11P55287 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH11P55287 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDH11P55287 CDV3P1-201ENST00000471403 739 ntBASIC17.95■□□□□ 0.46
CDH11P55287 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH11P55287 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH11P55287 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH11P55287 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH11P55287 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms