Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.52■□□□□ 0.72
CLNS1AP54105 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CLNS1AP54105 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 AC079598.2-202ENST00000546624 1451 ntBASIC19.52■□□□□ 0.72
CLNS1AP54105 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLNS1AP54105 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLNS1AP54105 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.52■□□□□ 0.71
CLNS1AP54105 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.52■□□□□ 0.71
CLNS1AP54105 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLNS1AP54105 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CLNS1AP54105 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.51■□□□□ 0.71
CLNS1AP54105 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.51■□□□□ 0.71
CLNS1AP54105 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLNS1AP54105 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L2-201ENST00000561772 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L6-201ENST00000626483 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L1-201ENST00000627662 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L8-201ENST00000629013 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L3-201ENST00000630187 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L7-201ENST00000630678 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 DUX4L5-201ENST00000630834 1275 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.51■□□□□ 0.71
CLNS1AP54105 AC116050.2-201ENST00000612102 1779 ntBASIC19.51■□□□□ 0.71
CLNS1AP54105 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CLNS1AP54105 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLNS1AP54105 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
CLNS1AP54105 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
CLNS1AP54105 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 LINC02228-203ENST00000641970 1355 ntBASIC19.5■□□□□ 0.71
CLNS1AP54105 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLNS1AP54105 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.5■□□□□ 0.71
CLNS1AP54105 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.5■□□□□ 0.71
CLNS1AP54105 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.5■□□□□ 0.71
CLNS1AP54105 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.5■□□□□ 0.71
CLNS1AP54105 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLNS1AP54105 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLNS1AP54105 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLNS1AP54105 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLNS1AP54105 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 TCF3P1-201ENST00000423021 1937 ntBASIC19.49■□□□□ 0.71
CLNS1AP54105 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLNS1AP54105 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLNS1AP54105 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLNS1AP54105 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CLNS1AP54105 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLNS1AP54105 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.49■□□□□ 0.71
CLNS1AP54105 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms