Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.81■□□□□ 0.76
LIMK2P53671 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.81■□□□□ 0.76
LIMK2P53671 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LIMK2P53671 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LIMK2P53671 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.81■□□□□ 0.76
LIMK2P53671 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.81■□□□□ 0.76
LIMK2P53671 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.8■□□□□ 0.76
LIMK2P53671 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 AP001271.2-201ENST00000624018 1556 ntBASIC19.8■□□□□ 0.76
LIMK2P53671 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.8■□□□□ 0.76
LIMK2P53671 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.8■□□□□ 0.76
LIMK2P53671 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.8■□□□□ 0.76
LIMK2P53671 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.8■□□□□ 0.76
LIMK2P53671 AC142381.4-202ENST00000563973 229 ntBASIC19.8■□□□□ 0.76
LIMK2P53671 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.8■□□□□ 0.76
LIMK2P53671 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 AP006294.2-201ENST00000641667 209 ntBASIC19.8■□□□□ 0.76
LIMK2P53671 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.8■□□□□ 0.76
LIMK2P53671 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
LIMK2P53671 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK2P53671 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LIMK2P53671 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.8■□□□□ 0.76
LIMK2P53671 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.79■□□□□ 0.76
LIMK2P53671 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK2P53671 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK2P53671 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK2P53671 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.79■□□□□ 0.76
LIMK2P53671 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LIMK2P53671 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK2P53671 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK2P53671 AC073648.6-201ENST00000641589 218 ntBASIC19.79■□□□□ 0.76
LIMK2P53671 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK2P53671 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK2P53671 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK2P53671 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LIMK2P53671 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK2P53671 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 AL158047.1-201ENST00000445918 881 ntBASIC19.78■□□□□ 0.76
LIMK2P53671 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
LIMK2P53671 AC008403.3-201ENST00000598924 454 ntBASIC19.78■□□□□ 0.76
LIMK2P53671 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.78■□□□□ 0.76
LIMK2P53671 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LIMK2P53671 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK2P53671 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LIMK2P53671 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms