Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL12P48061 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL12P48061 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL12P48061 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.67■□□□□ 0.74
CXCL12P48061 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.66■□□□□ 0.74
CXCL12P48061 PHGDH-210ENST00000641115 1638 ntBASIC19.66■□□□□ 0.74
CXCL12P48061 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CXCL12P48061 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCL12P48061 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.66■□□□□ 0.74
CXCL12P48061 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCL12P48061 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCL12P48061 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.66■□□□□ 0.74
CXCL12P48061 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL12P48061 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
CXCL12P48061 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CXCL12P48061 PLK5-205ENST00000642079 1969 ntBASIC19.65■□□□□ 0.74
CXCL12P48061 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CXCL12P48061 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.65■□□□□ 0.74
CXCL12P48061 AL359075.1-203ENST00000462729 1002 ntBASIC19.65■□□□□ 0.74
CXCL12P48061 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL12P48061 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL12P48061 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CXCL12P48061 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL12P48061 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL12P48061 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 HCG4P8-203ENST00000443049 980 ntBASIC19.64■□□□□ 0.73
CXCL12P48061 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.64■□□□□ 0.73
CXCL12P48061 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.64■□□□□ 0.73
CXCL12P48061 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CXCL12P48061 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CXCL12P48061 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CXCL12P48061 FP700111.2-201ENST00000619190 1892 ntBASIC19.64■□□□□ 0.73
CXCL12P48061 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CXCL12P48061 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL12P48061 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.63■□□□□ 0.73
CXCL12P48061 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CXCL12P48061 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CXCL12P48061 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CXCL12P48061 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CXCL12P48061 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.63■□□□□ 0.73
CXCL12P48061 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CXCL12P48061 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CXCL12P48061 FBXW4P1-201ENST00000426721 2239 ntBASIC19.63■□□□□ 0.73
CXCL12P48061 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.63■□□□□ 0.73
CXCL12P48061 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL12P48061 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 AC005332.1-201ENST00000577698 1310 ntBASIC19.62■□□□□ 0.73
CXCL12P48061 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCL12P48061 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCL12P48061 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL12P48061 Z85996.1-201ENST00000494644 937 ntBASIC19.62■□□□□ 0.73
CXCL12P48061 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms