Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HADHAP40939 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
HADHAP40939 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HADHAP40939 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HADHAP40939 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.89■□□□□ 0.77
HADHAP40939 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
HADHAP40939 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.88■□□□□ 0.77
HADHAP40939 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.88■□□□□ 0.77
HADHAP40939 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.88■□□□□ 0.77
HADHAP40939 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.88■□□□□ 0.77
HADHAP40939 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
HADHAP40939 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
HADHAP40939 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
HADHAP40939 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HADHAP40939 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.87■□□□□ 0.77
HADHAP40939 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.87■□□□□ 0.77
HADHAP40939 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.87■□□□□ 0.77
HADHAP40939 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.87■□□□□ 0.77
HADHAP40939 PNMA6B-201ENST00000538162 1200 ntBASIC19.87■□□□□ 0.77
HADHAP40939 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.87■□□□□ 0.77
HADHAP40939 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.87■□□□□ 0.77
HADHAP40939 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.87■□□□□ 0.77
HADHAP40939 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
HADHAP40939 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.87■□□□□ 0.77
HADHAP40939 TREX1-205ENST00000625293 1783 ntBASIC19.87■□□□□ 0.77
HADHAP40939 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HADHAP40939 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HADHAP40939 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.86■□□□□ 0.77
HADHAP40939 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HADHAP40939 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.86■□□□□ 0.77
HADHAP40939 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HADHAP40939 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HADHAP40939 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.86■□□□□ 0.77
HADHAP40939 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.86■□□□□ 0.77
HADHAP40939 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HADHAP40939 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.85■□□□□ 0.77
HADHAP40939 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.85■□□□□ 0.77
HADHAP40939 PHGDH-210ENST00000641115 1638 ntBASIC19.85■□□□□ 0.77
HADHAP40939 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.85■□□□□ 0.77
HADHAP40939 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.85■□□□□ 0.77
HADHAP40939 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.85■□□□□ 0.77
HADHAP40939 AP001271.2-201ENST00000624018 1556 ntBASIC19.85■□□□□ 0.77
HADHAP40939 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HADHAP40939 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.84■□□□□ 0.77
HADHAP40939 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
HADHAP40939 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
HADHAP40939 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
HADHAP40939 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.84■□□□□ 0.77
HADHAP40939 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.84■□□□□ 0.77
HADHAP40939 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.84■□□□□ 0.77
HADHAP40939 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.84■□□□□ 0.77
HADHAP40939 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms