Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SOX6P35712 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX6P35712 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SOX6P35712 AC135050.7-201ENST00000624508 2218 ntBASIC17.63■□□□□ 0.41
SOX6P35712 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX6P35712 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SOX6P35712 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX6P35712 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 AC096631.2-201ENST00000436136 790 ntBASIC17.62■□□□□ 0.41
SOX6P35712 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.62■□□□□ 0.41
SOX6P35712 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX6P35712 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
SOX6P35712 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX6P35712 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX6P35712 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SOX6P35712 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX6P35712 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SOX6P35712 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SOX6P35712 UNC93B3-201ENST00000308076 687 ntBASIC17.61■□□□□ 0.41
SOX6P35712 SERBP1P1-201ENST00000396021 1160 ntBASIC17.61■□□□□ 0.41
SOX6P35712 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SOX6P35712 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX6P35712 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.61■□□□□ 0.41
SOX6P35712 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SOX6P35712 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX6P35712 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX6P35712 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 FZD10-202ENST00000539839 3282 ntBASIC17.6■□□□□ 0.41
SOX6P35712 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 AC104581.1-202ENST00000635932 2618 ntBASIC17.6■□□□□ 0.41
SOX6P35712 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SOX6P35712 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX6P35712 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SOX6P35712 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX6P35712 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SOX6P35712 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 AC009113.1-201ENST00000570267 2443 ntBASIC17.59■□□□□ 0.41
SOX6P35712 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms