Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN7P35236 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN7P35236 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN7P35236 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN7P35236 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN7P35236 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN7P35236 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN7P35236 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN7P35236 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN7P35236 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN7P35236 AL121832.2-201ENST00000610979 668 ntBASIC20.34■□□□□ 0.85
PTPN7P35236 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN7P35236 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN7P35236 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PTPN7P35236 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN7P35236 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN7P35236 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN7P35236 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN7P35236 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN7P35236 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.33■□□□□ 0.85
PTPN7P35236 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN7P35236 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN7P35236 AP000974.1-201ENST00000623909 2387 ntBASIC20.33■□□□□ 0.85
PTPN7P35236 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN7P35236 AL390719.1-204ENST00000412397 1219 ntBASIC20.33■□□□□ 0.85
PTPN7P35236 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN7P35236 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN7P35236 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.33■□□□□ 0.85
PTPN7P35236 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN7P35236 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN7P35236 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN7P35236 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PTPN7P35236 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.33■□□□□ 0.84
PTPN7P35236 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN7P35236 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN7P35236 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN7P35236 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN7P35236 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN7P35236 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN7P35236 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 DUSP5P2-201ENST00000426873 1033 ntBASIC20.32■□□□□ 0.84
PTPN7P35236 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.32■□□□□ 0.84
PTPN7P35236 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN7P35236 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN7P35236 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.32■□□□□ 0.84
PTPN7P35236 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN7P35236 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN7P35236 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN7P35236 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN7P35236 TNXA-203ENST00000507684 2038 ntBASIC20.31■□□□□ 0.84
PTPN7P35236 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN7P35236 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPN7P35236 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN7P35236 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN7P35236 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.31■□□□□ 0.84
PTPN7P35236 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN7P35236 GUSBP6-202ENST00000438529 1198 ntBASIC20.31■□□□□ 0.84
PTPN7P35236 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN7P35236 AC083906.2-201ENST00000511578 360 ntBASIC20.31■□□□□ 0.84
PTPN7P35236 AC091874.3-201ENST00000512672 1195 ntBASIC20.31■□□□□ 0.84
PTPN7P35236 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN7P35236 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN7P35236 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN7P35236 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN7P35236 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN7P35236 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN7P35236 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
PTPN7P35236 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN7P35236 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN7P35236 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN7P35236 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN7P35236 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms