Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 AC004408.2-201ENST00000623613 2777 ntBASIC16.54■□□□□ 0.24
LMO1P25800 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO1P25800 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.53■□□□□ 0.24
LMO1P25800 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.53■□□□□ 0.24
LMO1P25800 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.53■□□□□ 0.24
LMO1P25800 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO1P25800 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO1P25800 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO1P25800 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.52■□□□□ 0.24
LMO1P25800 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 HLA-B-256ENST00000639848 1089 ntBASIC16.52■□□□□ 0.24
LMO1P25800 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO1P25800 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO1P25800 AC018553.1-201ENST00000616682 1458 ntBASIC16.52■□□□□ 0.23
LMO1P25800 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO1P25800 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO1P25800 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LMO1P25800 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.52■□□□□ 0.23
LMO1P25800 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
LMO1P25800 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO1P25800 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LMO1P25800 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO1P25800 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.51■□□□□ 0.23
LMO1P25800 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO1P25800 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO1P25800 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LMO1P25800 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO1P25800 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
LMO1P25800 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LMO1P25800 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LMO1P25800 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO1P25800 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LMO1P25800 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO1P25800 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms