Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TSPY15P-201ENST00000457163 923 ntBASIC16.63■□□□□ 0.25
COL8A2P25067 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
COL8A2P25067 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL8A2P25067 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.62■□□□□ 0.25
COL8A2P25067 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL8A2P25067 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL8A2P25067 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
COL8A2P25067 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.62■□□□□ 0.25
COL8A2P25067 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 FAM197Y1-201ENST00000421178 764 ntBASIC16.62■□□□□ 0.25
COL8A2P25067 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.62■□□□□ 0.25
COL8A2P25067 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.62■□□□□ 0.25
COL8A2P25067 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 REXO1L12P-201ENST00000622156 912 ntBASIC16.62■□□□□ 0.25
COL8A2P25067 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 PHGDH-210ENST00000641115 1638 ntBASIC16.62■□□□□ 0.25
COL8A2P25067 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL8A2P25067 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
COL8A2P25067 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL8A2P25067 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 BX119927.1-201ENST00000636596 1552 ntBASIC16.61■□□□□ 0.25
COL8A2P25067 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 AL353807.1-201ENST00000427475 662 ntBASIC16.61■□□□□ 0.25
COL8A2P25067 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.61■□□□□ 0.25
COL8A2P25067 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 MIR4785-201ENST00000585005 73 ntBASIC16.61■□□□□ 0.25
COL8A2P25067 CD177P1-201ENST00000606252 935 ntBASIC16.61■□□□□ 0.25
COL8A2P25067 AC073195.1-201ENST00000607241 877 ntBASIC16.61■□□□□ 0.25
COL8A2P25067 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
COL8A2P25067 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COL8A2P25067 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL8A2P25067 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.61■□□□□ 0.25
COL8A2P25067 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COL8A2P25067 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COL8A2P25067 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.6■□□□□ 0.25
COL8A2P25067 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 AP002982.1-201ENST00000492365 877 ntBASIC16.6■□□□□ 0.25
COL8A2P25067 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.6■□□□□ 0.25
COL8A2P25067 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.6■□□□□ 0.25
COL8A2P25067 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.6■□□□□ 0.25
COL8A2P25067 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms