Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPA1P20036 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 POM121L13P-201ENST00000422362 380 ntBASIC19.85■□□□□ 0.77
HLA-DPA1P20036 AP003097.1-201ENST00000530657 1135 ntBASIC19.85■□□□□ 0.77
HLA-DPA1P20036 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 AL121829.2-201ENST00000620908 328 ntBASIC19.85■□□□□ 0.77
HLA-DPA1P20036 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DPA1P20036 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DPA1P20036 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 AC008403.3-201ENST00000598924 454 ntBASIC19.83■□□□□ 0.77
HLA-DPA1P20036 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DPA1P20036 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DPA1P20036 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms