Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.27■□□□□ 0.84
ERCC2P18074 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC2P18074 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC2P18074 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.27■□□□□ 0.83
ERCC2P18074 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC2P18074 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC2P18074 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC2P18074 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC2P18074 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ERCC2P18074 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC2P18074 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC2P18074 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ERCC2P18074 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.26■□□□□ 0.83
ERCC2P18074 KRT17P3-201ENST00000420566 1262 ntBASIC20.26■□□□□ 0.83
ERCC2P18074 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC2P18074 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.26■□□□□ 0.83
ERCC2P18074 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.26■□□□□ 0.83
ERCC2P18074 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC2P18074 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ERCC2P18074 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC2P18074 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.25■□□□□ 0.83
ERCC2P18074 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC2P18074 AC233263.1-201ENST00000578059 224 ntBASIC20.25■□□□□ 0.83
ERCC2P18074 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.25■□□□□ 0.83
ERCC2P18074 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ERCC2P18074 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC2P18074 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC2P18074 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC2P18074 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC2P18074 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ERCC2P18074 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC2P18074 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC2P18074 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC2P18074 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ERCC2P18074 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC2P18074 AC069544.1-201ENST00000609399 999 ntBASIC20.24■□□□□ 0.83
ERCC2P18074 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC2P18074 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC2P18074 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC2P18074 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 AP006587.1-201ENST00000534129 1502 ntBASIC20.23■□□□□ 0.83
ERCC2P18074 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC2P18074 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
ERCC2P18074 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC2P18074 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC2P18074 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
ERCC2P18074 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC2P18074 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC2P18074 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ERCC2P18074 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms