Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
H2AFXP16104 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2AFXP16104 AC106820.2-201ENST00000563775 3264 ntBASIC20.46■□□□□ 0.87
H2AFXP16104 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2AFXP16104 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
H2AFXP16104 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
H2AFXP16104 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2AFXP16104 AP001271.2-201ENST00000624018 1556 ntBASIC20.46■□□□□ 0.87
H2AFXP16104 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2AFXP16104 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.45■□□□□ 0.86
H2AFXP16104 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.45■□□□□ 0.86
H2AFXP16104 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.45■□□□□ 0.86
H2AFXP16104 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2AFXP16104 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.45■□□□□ 0.86
H2AFXP16104 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
H2AFXP16104 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.44■□□□□ 0.86
H2AFXP16104 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 HSD17B1P1-201ENST00000590052 955 ntBASIC20.44■□□□□ 0.86
H2AFXP16104 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.44■□□□□ 0.86
H2AFXP16104 AC008764.6-201ENST00000595909 2069 ntBASIC20.44■□□□□ 0.86
H2AFXP16104 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
H2AFXP16104 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2AFXP16104 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
H2AFXP16104 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.43■□□□□ 0.86
H2AFXP16104 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 SERBP1P1-201ENST00000396021 1160 ntBASIC20.43■□□□□ 0.86
H2AFXP16104 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.43■□□□□ 0.86
H2AFXP16104 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.43■□□□□ 0.86
H2AFXP16104 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
H2AFXP16104 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
H2AFXP16104 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
H2AFXP16104 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.43■□□□□ 0.86
H2AFXP16104 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2AFXP16104 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.43■□□□□ 0.86
H2AFXP16104 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
H2AFXP16104 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
H2AFXP16104 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
H2AFXP16104 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.42■□□□□ 0.86
H2AFXP16104 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
H2AFXP16104 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
H2AFXP16104 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
H2AFXP16104 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2AFXP16104 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H2AFXP16104 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2AFXP16104 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms