Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 KRASP1-201ENST00000407852 552 ntBASIC18.7■□□□□ 0.58
ZNF888P0CJ79 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF888P0CJ79 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF888P0CJ79 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 AC098590.1-201ENST00000468126 897 ntBASIC18.68■□□□□ 0.58
ZNF888P0CJ79 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 AC124016.1-201ENST00000609552 612 ntBASIC18.68■□□□□ 0.58
ZNF888P0CJ79 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 TMEM191A-211ENST00000637163 1067 ntBASIC18.68■□□□□ 0.58
ZNF888P0CJ79 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 NBPF21P-201ENST00000425093 1451 ntBASIC18.68■□□□□ 0.58
ZNF888P0CJ79 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF888P0CJ79 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 RPPH1-201ENST00000516869 333 ntBASIC18.67■□□□□ 0.58
ZNF888P0CJ79 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF888P0CJ79 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.66■□□□□ 0.58
ZNF888P0CJ79 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF888P0CJ79 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms