Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.4■□□□□ 0.86
CD48P09326 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.4■□□□□ 0.86
CD48P09326 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CD48P09326 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.4■□□□□ 0.86
CD48P09326 AC005332.7-201ENST00000614046 2005 ntBASIC20.4■□□□□ 0.86
CD48P09326 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.39■□□□□ 0.86
CD48P09326 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CD48P09326 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD48P09326 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.39■□□□□ 0.86
CD48P09326 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD48P09326 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.39■□□□□ 0.86
CD48P09326 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD48P09326 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD48P09326 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CD48P09326 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.39■□□□□ 0.85
CD48P09326 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.39■□□□□ 0.85
CD48P09326 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.39■□□□□ 0.85
CD48P09326 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.39■□□□□ 0.85
CD48P09326 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CD48P09326 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.39■□□□□ 0.85
CD48P09326 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.39■□□□□ 0.85
CD48P09326 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD48P09326 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CD48P09326 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CD48P09326 Z82202.1-201ENST00000623446 1880 ntBASIC20.39■□□□□ 0.85
CD48P09326 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.39■□□□□ 0.85
CD48P09326 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
CD48P09326 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD48P09326 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.38■□□□□ 0.85
CD48P09326 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 ID1-201ENST00000376105 1233 ntBASIC20.38■□□□□ 0.85
CD48P09326 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD48P09326 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
CD48P09326 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CD48P09326 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CD48P09326 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.37■□□□□ 0.85
CD48P09326 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.37■□□□□ 0.85
CD48P09326 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.37■□□□□ 0.85
CD48P09326 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.37■□□□□ 0.85
CD48P09326 SOX15-203ENST00000570788 1093 ntBASIC20.37■□□□□ 0.85
CD48P09326 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.37■□□□□ 0.85
CD48P09326 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CD48P09326 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CD48P09326 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD48P09326 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
CD48P09326 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.36■□□□□ 0.85
CD48P09326 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.36■□□□□ 0.85
CD48P09326 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD48P09326 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.36■□□□□ 0.85
CD48P09326 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.36■□□□□ 0.85
CD48P09326 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CD48P09326 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.36■□□□□ 0.85
CD48P09326 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.36■□□□□ 0.85
CD48P09326 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CD48P09326 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD48P09326 AC087289.5-201ENST00000586076 3175 ntBASIC20.36■□□□□ 0.85
CD48P09326 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CD48P09326 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CD48P09326 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.35■□□□□ 0.85
CD48P09326 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms