Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.86■□□□□ 0.77
RETP07949 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.86■□□□□ 0.77
RETP07949 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.86■□□□□ 0.77
RETP07949 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.86■□□□□ 0.77
RETP07949 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.86■□□□□ 0.77
RETP07949 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RETP07949 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
RETP07949 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.86■□□□□ 0.77
RETP07949 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.86■□□□□ 0.77
RETP07949 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
RETP07949 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RETP07949 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.86■□□□□ 0.77
RETP07949 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.85■□□□□ 0.77
RETP07949 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RETP07949 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RETP07949 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RETP07949 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.85■□□□□ 0.77
RETP07949 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 AC063952.2-201ENST00000498792 1227 ntBASIC19.85■□□□□ 0.77
RETP07949 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.85■□□□□ 0.77
RETP07949 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.85■□□□□ 0.77
RETP07949 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.85■□□□□ 0.77
RETP07949 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
RETP07949 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.85■□□□□ 0.77
RETP07949 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETP07949 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RETP07949 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.84■□□□□ 0.77
RETP07949 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RETP07949 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.84■□□□□ 0.77
RETP07949 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.84■□□□□ 0.77
RETP07949 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.84■□□□□ 0.77
RETP07949 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.84■□□□□ 0.77
RETP07949 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.84■□□□□ 0.77
RETP07949 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RETP07949 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.84■□□□□ 0.77
RETP07949 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.84■□□□□ 0.77
RETP07949 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RETP07949 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RETP07949 AC092667.1-201ENST00000434301 2586 ntBASIC19.84■□□□□ 0.77
RETP07949 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RETP07949 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.83■□□□□ 0.77
RETP07949 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RETP07949 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RETP07949 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RETP07949 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RETP07949 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.83■□□□□ 0.77
RETP07949 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RETP07949 TSPY14P-201ENST00000303979 915 ntBASIC19.83■□□□□ 0.77
RETP07949 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.83■□□□□ 0.77
RETP07949 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.83■□□□□ 0.77
RETP07949 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RETP07949 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RETP07949 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.83■□□□□ 0.76
RETP07949 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
RETP07949 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RETP07949 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RETP07949 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.82■□□□□ 0.76
RETP07949 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms