Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.72■■□□□ 1.39
CHGBP05060 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 AL158211.5-201ENST00000623583 2518 ntBASIC23.72■■□□□ 1.39
CHGBP05060 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.72■■□□□ 1.39
CHGBP05060 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 AP006587.1-201ENST00000534129 1502 ntBASIC23.71■■□□□ 1.39
CHGBP05060 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.71■■□□□ 1.39
CHGBP05060 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CHGBP05060 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CHGBP05060 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.71■■□□□ 1.39
CHGBP05060 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CHGBP05060 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CHGBP05060 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.71■■□□□ 1.39
CHGBP05060 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.71■■□□□ 1.39
CHGBP05060 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 PRKY-204ENST00000533551 1019 ntBASIC23.71■■□□□ 1.39
CHGBP05060 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CHGBP05060 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHGBP05060 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
CHGBP05060 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CHGBP05060 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.7■■□□□ 1.39
CHGBP05060 AC009237.14-201ENST00000609975 1594 ntBASIC23.7■■□□□ 1.38
CHGBP05060 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CHGBP05060 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 AC008550.1-201ENST00000511500 884 ntBASIC23.7■■□□□ 1.38
CHGBP05060 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.7■■□□□ 1.38
CHGBP05060 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.7■■□□□ 1.38
CHGBP05060 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.7■■□□□ 1.38
CHGBP05060 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.7■■□□□ 1.38
CHGBP05060 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.7■■□□□ 1.38
CHGBP05060 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHGBP05060 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.7■■□□□ 1.38
CHGBP05060 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
CHGBP05060 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.69■■□□□ 1.38
CHGBP05060 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.69■■□□□ 1.38
CHGBP05060 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.69■■□□□ 1.38
CHGBP05060 UBE2SP1-201ENST00000450587 669 ntBASIC23.69■■□□□ 1.38
CHGBP05060 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CHGBP05060 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CHGBP05060 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.69■■□□□ 1.38
CHGBP05060 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.69■■□□□ 1.38
CHGBP05060 TMEM179-206ENST00000616017 1645 ntBASIC23.69■■□□□ 1.38
CHGBP05060 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHGBP05060 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 SLC25A24-204ENST00000569674 2357 ntBASIC23.68■■□□□ 1.38
CHGBP05060 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.68■■□□□ 1.38
CHGBP05060 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 AL596275.1-201ENST00000423464 877 ntBASIC23.68■■□□□ 1.38
CHGBP05060 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.68■■□□□ 1.38
CHGBP05060 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.68■■□□□ 1.38
CHGBP05060 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CHGBP05060 AP001271.2-201ENST00000624018 1556 ntBASIC23.68■■□□□ 1.38
CHGBP05060 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CHGBP05060 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHGBP05060 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.68■■□□□ 1.38
CHGBP05060 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.67■■□□□ 1.38
CHGBP05060 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.67■■□□□ 1.38
CHGBP05060 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.67■■□□□ 1.38
CHGBP05060 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.67■■□□□ 1.38
CHGBP05060 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.67■■□□□ 1.38
CHGBP05060 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.67■■□□□ 1.38
CHGBP05060 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CHGBP05060 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms