Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20■□□□□ 0.79
MT-ND3P03897 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
MT-ND3P03897 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MT-ND3P03897 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MT-ND3P03897 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 ABHD17AP1-201ENST00000358206 933 ntBASIC19.99■□□□□ 0.79
MT-ND3P03897 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.99■□□□□ 0.79
MT-ND3P03897 KRT18P6-201ENST00000555540 1265 ntBASIC19.99■□□□□ 0.79
MT-ND3P03897 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.99■□□□□ 0.79
MT-ND3P03897 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 AC068338.2-201ENST00000563278 1430 ntBASIC19.99■□□□□ 0.79
MT-ND3P03897 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MT-ND3P03897 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.99■□□□□ 0.79
MT-ND3P03897 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND3P03897 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND3P03897 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.98■□□□□ 0.79
MT-ND3P03897 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.98■□□□□ 0.79
MT-ND3P03897 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-ND3P03897 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MT-ND3P03897 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-ND3P03897 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.98■□□□□ 0.79
MT-ND3P03897 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MT-ND3P03897 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-ND3P03897 CYP2T1P-201ENST00000432607 1285 ntBASIC19.98■□□□□ 0.79
MT-ND3P03897 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MT-ND3P03897 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-ND3P03897 AL138781.1-201ENST00000566567 1274 ntBASIC19.98■□□□□ 0.79
MT-ND3P03897 MIR4758-201ENST00000577688 71 ntBASIC19.98■□□□□ 0.79
MT-ND3P03897 AL356652.1-201ENST00000615962 565 ntBASIC19.98■□□□□ 0.79
MT-ND3P03897 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MT-ND3P03897 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND3P03897 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
MT-ND3P03897 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MT-ND3P03897 AC009237.14-201ENST00000609975 1594 ntBASIC19.97■□□□□ 0.79
MT-ND3P03897 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.97■□□□□ 0.79
MT-ND3P03897 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
MT-ND3P03897 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MT-ND3P03897 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.97■□□□□ 0.79
MT-ND3P03897 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND3P03897 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND3P03897 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MT-ND3P03897 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MT-ND3P03897 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND3P03897 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MT-ND3P03897 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.96■□□□□ 0.79
MT-ND3P03897 AL512625.2-201ENST00000417533 625 ntBASIC19.96■□□□□ 0.79
MT-ND3P03897 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND3P03897 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.96■□□□□ 0.79
MT-ND3P03897 TMEM191A-211ENST00000637163 1067 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms