Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TSPAN3O60637 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TSPAN3O60637 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TSPAN3O60637 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.29■□□□□ 0.84
TSPAN3O60637 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TSPAN3O60637 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.29■□□□□ 0.84
TSPAN3O60637 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN3O60637 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.29■□□□□ 0.84
TSPAN3O60637 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TSPAN3O60637 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TSPAN3O60637 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TSPAN3O60637 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TSPAN3O60637 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.28■□□□□ 0.84
TSPAN3O60637 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 FAM197Y1-201ENST00000421178 764 ntBASIC20.28■□□□□ 0.84
TSPAN3O60637 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.28■□□□□ 0.84
TSPAN3O60637 AP002982.1-201ENST00000492365 877 ntBASIC20.28■□□□□ 0.84
TSPAN3O60637 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.28■□□□□ 0.84
TSPAN3O60637 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.28■□□□□ 0.84
TSPAN3O60637 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.28■□□□□ 0.84
TSPAN3O60637 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN3O60637 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN3O60637 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TSPAN3O60637 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.27■□□□□ 0.84
TSPAN3O60637 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.27■□□□□ 0.84
TSPAN3O60637 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TSPAN3O60637 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.27■□□□□ 0.84
TSPAN3O60637 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 AC099778.1-201ENST00000568593 1911 ntBASIC20.27■□□□□ 0.84
TSPAN3O60637 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.27■□□□□ 0.84
TSPAN3O60637 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.27■□□□□ 0.84
TSPAN3O60637 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TSPAN3O60637 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN3O60637 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.27■□□□□ 0.83
TSPAN3O60637 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TSPAN3O60637 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TSPAN3O60637 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TSPAN3O60637 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.27■□□□□ 0.83
TSPAN3O60637 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TSPAN3O60637 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TSPAN3O60637 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TSPAN3O60637 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.26■□□□□ 0.83
TSPAN3O60637 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.26■□□□□ 0.83
TSPAN3O60637 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TSPAN3O60637 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.26■□□□□ 0.83
TSPAN3O60637 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.26■□□□□ 0.83
TSPAN3O60637 CD177P1-201ENST00000606252 935 ntBASIC20.26■□□□□ 0.83
TSPAN3O60637 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
TSPAN3O60637 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TSPAN3O60637 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms