Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM38O00635 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM38O00635 AL049637.2-201ENST00000641778 930 ntBASIC19.79■□□□□ 0.76
TRIM38O00635 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM38O00635 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM38O00635 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM38O00635 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM38O00635 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM38O00635 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM38O00635 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 BX088651.1-201ENST00000540551 451 ntBASIC19.78■□□□□ 0.76
TRIM38O00635 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM38O00635 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRIM38O00635 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM38O00635 AC099778.1-201ENST00000568593 1911 ntBASIC19.78■□□□□ 0.76
TRIM38O00635 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM38O00635 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM38O00635 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 AC087289.5-201ENST00000586076 3175 ntBASIC19.77■□□□□ 0.76
TRIM38O00635 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM38O00635 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRIM38O00635 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
TRIM38O00635 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.77■□□□□ 0.76
TRIM38O00635 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
TRIM38O00635 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM38O00635 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM38O00635 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
TRIM38O00635 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRIM38O00635 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 SMG8-203ENST00000578922 2178 ntBASIC19.76■□□□□ 0.75
TRIM38O00635 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM38O00635 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.76■□□□□ 0.75
TRIM38O00635 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM38O00635 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM38O00635 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM38O00635 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM38O00635 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM38O00635 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM38O00635 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
TRIM38O00635 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM38O00635 FAM210CP-201ENST00000445714 574 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms