Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TAF4O00268 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.23■□□□□ 0.67
TAF4O00268 AC073195.1-201ENST00000607241 877 ntBASIC19.23■□□□□ 0.67
TAF4O00268 AC091076.1-201ENST00000610741 619 ntBASIC19.23■□□□□ 0.67
TAF4O00268 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.23■□□□□ 0.67
TAF4O00268 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.22■□□□□ 0.67
TAF4O00268 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TAF4O00268 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TAF4O00268 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
TAF4O00268 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
TAF4O00268 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.22■□□□□ 0.67
TAF4O00268 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.22■□□□□ 0.67
TAF4O00268 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.22■□□□□ 0.67
TAF4O00268 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.22■□□□□ 0.67
TAF4O00268 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.22■□□□□ 0.67
TAF4O00268 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TAF4O00268 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 AC003102.1-202ENST00000563394 1796 ntBASIC19.21■□□□□ 0.67
TAF4O00268 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.21■□□□□ 0.67
TAF4O00268 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.21■□□□□ 0.67
TAF4O00268 AL353807.1-201ENST00000427475 662 ntBASIC19.21■□□□□ 0.67
TAF4O00268 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 KRT16P5-201ENST00000455284 522 ntBASIC19.21■□□□□ 0.67
TAF4O00268 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TAF4O00268 FITM1-202ENST00000559294 800 ntBASIC19.21■□□□□ 0.67
TAF4O00268 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.21■□□□□ 0.67
TAF4O00268 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.21■□□□□ 0.67
TAF4O00268 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.21■□□□□ 0.67
TAF4O00268 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TAF4O00268 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 CRYGFP-201ENST00000418459 633 ntBASIC19.2■□□□□ 0.66
TAF4O00268 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 KRT18P48-201ENST00000434763 852 ntBASIC19.2■□□□□ 0.66
TAF4O00268 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.2■□□□□ 0.66
TAF4O00268 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.2■□□□□ 0.66
TAF4O00268 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.2■□□□□ 0.66
TAF4O00268 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TAF4O00268 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TAF4O00268 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TAF4O00268 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TAF4O00268 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.19■□□□□ 0.66
TAF4O00268 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.19■□□□□ 0.66
TAF4O00268 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
TAF4O00268 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.19■□□□□ 0.66
TAF4O00268 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms