Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CCDC188H7C350 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC188H7C350 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC188H7C350 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC188H7C350 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC188H7C350 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC188H7C350 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC188H7C350 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC188H7C350 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 KRT18P61-201ENST00000585825 1298 ntBASIC20.44■□□□□ 0.86
CCDC188H7C350 MFSD11-216ENST00000590393 1141 ntBASIC20.44■□□□□ 0.86
CCDC188H7C350 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC188H7C350 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC188H7C350 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC188H7C350 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC188H7C350 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC188H7C350 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC188H7C350 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 AC013268.1-206ENST00000638368 961 ntBASIC20.43■□□□□ 0.86
CCDC188H7C350 AC112229.1-201ENST00000639295 961 ntBASIC20.43■□□□□ 0.86
CCDC188H7C350 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC188H7C350 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC188H7C350 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC188H7C350 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC188H7C350 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC188H7C350 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC188H7C350 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC188H7C350 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC188H7C350 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC188H7C350 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC188H7C350 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC188H7C350 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC188H7C350 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC188H7C350 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC188H7C350 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC188H7C350 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms