Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 LTB4R2-202ENST00000528054 3092 ntBASIC17.16■□□□□ 0.34
SHISA3A0PJX4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 WIZP1-201ENST00000531444 2299 ntBASIC17.16■□□□□ 0.34
SHISA3A0PJX4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CDV3P1-201ENST00000471403 739 ntBASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CYP21A1P-202ENST00000354927 1481 ntBASIC17.16■□□□□ 0.34
SHISA3A0PJX4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 TEX21P-204ENST00000641479 1693 ntBASIC17.16■□□□□ 0.34
SHISA3A0PJX4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 KRT16P6-202ENST00000425692 1426 ntBASIC17.15■□□□□ 0.34
SHISA3A0PJX4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 AC097381.1-201ENST00000429019 1296 ntBASIC17.15■□□□□ 0.34
SHISA3A0PJX4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.15■□□□□ 0.34
SHISA3A0PJX4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA3A0PJX4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SHISA3A0PJX4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SHISA3A0PJX4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 PGM5P4-201ENST00000421970 445 ntBASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AL031963.3-201ENST00000606441 850 ntBASIC17.14■□□□□ 0.33
SHISA3A0PJX4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.14■□□□□ 0.33
SHISA3A0PJX4 AC090164.3-201ENST00000610780 2143 ntBASIC17.14■□□□□ 0.33
SHISA3A0PJX4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms