Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 CROCCP1-201ENST00000426910 5675 ntBASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 AL139246.5-201ENST00000606645 996 ntBASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-1A0A0B4J241 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 TNXA-203ENST00000507684 2038 ntBASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-1A0A0B4J241 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 TREX1-205ENST00000625293 1783 ntBASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms