Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 AL161938.1-201ENST00000569833 2180 ntBASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV5-3A0A0A0MS03 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV5-3A0A0A0MS03 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 AC007322.1-201ENST00000426983 750 ntBASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-3A0A0A0MS03 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 GPX1P1-201ENST00000388829 606 ntBASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-3A0A0A0MS03 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 AC141586.3-201ENST00000562166 1838 ntBASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 TEX21P-204ENST00000641479 1693 ntBASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-3A0A0A0MS03 TFP1-202ENST00000475455 1573 ntBASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms