Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 AP003972.1-201ENST00000625192 5446 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 DDX50P1-201ENST00000438163 2400 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 RNU6-1339P-201ENST00000363574 91 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 RNA5SP442-201ENST00000365050 107 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 MIR27A-201ENST00000385073 78 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 RN7SKP261-201ENST00000410948 278 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AC092745.2-202ENST00000411880 369 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 MTND3P17-201ENST00000416968 344 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 RPS3AP9-201ENST00000417027 792 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 AL157884.1-201ENST00000424561 454 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AL354983.1-201ENST00000434580 906 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 USP9YP12-201ENST00000450481 570 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 FTH1P7-201ENST00000450676 552 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 RPL36AP55-201ENST00000454114 305 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
HOXA2O43364 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 NDUFS5P2-201ENST00000484004 306 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 AL445187.1-201ENST00000502685 260 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 MTCO1P30-201ENST00000515244 580 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 IGKV1D-32-201ENST00000517449 318 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 IGJP1-201ENST00000522682 475 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.29□□□□□ -1.08
HOXA2O43364 OR6M3P-201ENST00000531567 700 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.29□□□□□ -1.08
HOXA2O43364 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.29□□□□□ -1.08
HOXA2O43364 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 AC006335.3-201ENST00000613408 292 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 AL391903.2-201ENST00000614532 247 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 MTND4P27-201ENST00000450813 1354 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXA2O43364 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.29□□□□□ -1.08
HOXA2O43364 AC003985.2-201ENST00000562268 1669 ntBASIC8.29□□□□□ -1.08
HOXA2O43364 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXA2O43364 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXA2O43364 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
HOXA2O43364 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXA2O43364 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
HOXA2O43364 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
HOXA2O43364 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXA2O43364 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXA2O43364 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXA2O43364 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXA2O43364 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXA2O43364 TMSB4XP2-201ENST00000335179 210 ntBASIC8.28□□□□□ -1.08
HOXA2O43364 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXA2O43364 RNA5SP218-201ENST00000363188 109 ntBASIC8.28□□□□□ -1.08
HOXA2O43364 RNU6-433P-201ENST00000363216 104 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms