RNA–Protein interactions for RNA: ENST00000428495.2

AL035665.1-201, humanhuman

TSL 3 BASIC

Gene AL035665.1, Length 1,669 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035665.1-201ENST00000428495 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
AL035665.1-201ENST00000428495 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
AL035665.1-201ENST00000428495 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
AL035665.1-201ENST00000428495 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
AL035665.1-201ENST00000428495 FOXD1Q16676 465 aa18.81■□□□□ 0.6
AL035665.1-201ENST00000428495 MSH5O43196 834 aa17.84■□□□□ 0.45
AL035665.1-201ENST00000428495 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
AL035665.1-201ENST00000428495 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
AL035665.1-201ENST00000428495 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
AL035665.1-201ENST00000428495 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
AL035665.1-201ENST00000428495 ADRA2BP18089 450 aa17.36■□□□□ 0.37
AL035665.1-201ENST00000428495 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
AL035665.1-201ENST00000428495 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
AL035665.1-201ENST00000428495 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
AL035665.1-201ENST00000428495 ABCC9O60706 1549 aa15.99■□□□□ 0.15
AL035665.1-201ENST00000428495 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
AL035665.1-201ENST00000428495 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
AL035665.1-201ENST00000428495 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
AL035665.1-201ENST00000428495 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
AL035665.1-201ENST00000428495 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
AL035665.1-201ENST00000428495 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
AL035665.1-201ENST00000428495 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
AL035665.1-201ENST00000428495 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
AL035665.1-201ENST00000428495 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
AL035665.1-201ENST00000428495 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
AL035665.1-201ENST00000428495 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0.01
AL035665.1-201ENST00000428495 NCBP3Q53F19 620 aaKnown RBP15.02□□□□□ -0.01
AL035665.1-201ENST00000428495 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
AL035665.1-201ENST00000428495 NACADO15069 1562 aa14.92□□□□□ -0.02
AL035665.1-201ENST00000428495 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
AL035665.1-201ENST00000428495 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
AL035665.1-201ENST00000428495 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
AL035665.1-201ENST00000428495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
AL035665.1-201ENST00000428495 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
AL035665.1-201ENST00000428495 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
AL035665.1-201ENST00000428495 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
AL035665.1-201ENST00000428495 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
AL035665.1-201ENST00000428495 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
AL035665.1-201ENST00000428495 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
AL035665.1-201ENST00000428495 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
AL035665.1-201ENST00000428495 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
AL035665.1-201ENST00000428495 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
AL035665.1-201ENST00000428495 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
AL035665.1-201ENST00000428495 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
AL035665.1-201ENST00000428495 CAPN15O75808 1086 aa14.21□□□□□ -0.13
AL035665.1-201ENST00000428495 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
AL035665.1-201ENST00000428495 KCNA4P22459 653 aa14.13□□□□□ -0.15
AL035665.1-201ENST00000428495 APLP2Q06481 763 aa14.12□□□□□ -0.15
AL035665.1-201ENST00000428495 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
AL035665.1-201ENST00000428495 DSG3P32926 999 aa14.07□□□□□ -0.16
AL035665.1-201ENST00000428495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
AL035665.1-201ENST00000428495 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
AL035665.1-201ENST00000428495 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
AL035665.1-201ENST00000428495 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
AL035665.1-201ENST00000428495 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
AL035665.1-201ENST00000428495 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
AL035665.1-201ENST00000428495 CUX2O14529 1486 aa13.84□□□□□ -0.19
AL035665.1-201ENST00000428495 POTEHQ6S545 545 aa13.8□□□□□ -0.2
AL035665.1-201ENST00000428495 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
AL035665.1-201ENST00000428495 ABCB7O75027 752 aa13.79□□□□□ -0.2
AL035665.1-201ENST00000428495 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
AL035665.1-201ENST00000428495 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
AL035665.1-201ENST00000428495 NESP48681 1621 aa13.69□□□□□ -0.22
AL035665.1-201ENST00000428495 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
AL035665.1-201ENST00000428495 HMGXB3Q12766 1538 aa13.65□□□□□ -0.22
AL035665.1-201ENST00000428495 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
AL035665.1-201ENST00000428495 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
AL035665.1-201ENST00000428495 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
AL035665.1-201ENST00000428495 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
AL035665.1-201ENST00000428495 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
AL035665.1-201ENST00000428495 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
AL035665.1-201ENST00000428495 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
AL035665.1-201ENST00000428495 LAMC3Q9Y6N6 1575 aa13.51□□□□□ -0.25
AL035665.1-201ENST00000428495 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
AL035665.1-201ENST00000428495 POLA2Q14181 598 aa13.47□□□□□ -0.25
AL035665.1-201ENST00000428495 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
AL035665.1-201ENST00000428495 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
AL035665.1-201ENST00000428495 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
AL035665.1-201ENST00000428495 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
AL035665.1-201ENST00000428495 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
AL035665.1-201ENST00000428495 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
AL035665.1-201ENST00000428495 MRC2Q9UBG0 1479 aa13.34□□□□□ -0.27
AL035665.1-201ENST00000428495 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
AL035665.1-201ENST00000428495 WDR62O43379 1518 aa13.32□□□□□ -0.28
AL035665.1-201ENST00000428495 WIZO95785 1651 aa13.29□□□□□ -0.28
AL035665.1-201ENST00000428495 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
AL035665.1-201ENST00000428495 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
AL035665.1-201ENST00000428495 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
AL035665.1-201ENST00000428495 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
AL035665.1-201ENST00000428495 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
AL035665.1-201ENST00000428495 CFTRP13569 1480 aa13.16□□□□□ -0.3
AL035665.1-201ENST00000428495 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
AL035665.1-201ENST00000428495 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
AL035665.1-201ENST00000428495 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
AL035665.1-201ENST00000428495 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
AL035665.1-201ENST00000428495 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
AL035665.1-201ENST00000428495 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
AL035665.1-201ENST00000428495 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
AL035665.1-201ENST00000428495 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
AL035665.1-201ENST00000428495 ZNF608Q9ULD9 1512 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms