RNA–Protein interactions for RNA: ENST00000450481.1

USP9YP12-201, Transcript of USP9Y pseudogene 12, humanhuman

BASIC

Gene USP9YP12, Length 570 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP12-201ENST00000450481 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
USP9YP12-201ENST00000450481 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
USP9YP12-201ENST00000450481 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
USP9YP12-201ENST00000450481 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
USP9YP12-201ENST00000450481 FOXD1Q16676 465 aa18.67■□□□□ 0.58
USP9YP12-201ENST00000450481 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
USP9YP12-201ENST00000450481 MSH5O43196 834 aa17.5■□□□□ 0.39
USP9YP12-201ENST00000450481 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
USP9YP12-201ENST00000450481 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
USP9YP12-201ENST00000450481 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
USP9YP12-201ENST00000450481 ADRA2BP18089 450 aa17.29■□□□□ 0.36
USP9YP12-201ENST00000450481 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
USP9YP12-201ENST00000450481 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
USP9YP12-201ENST00000450481 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
USP9YP12-201ENST00000450481 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
USP9YP12-201ENST00000450481 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
USP9YP12-201ENST00000450481 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
USP9YP12-201ENST00000450481 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
USP9YP12-201ENST00000450481 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
USP9YP12-201ENST00000450481 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
USP9YP12-201ENST00000450481 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
USP9YP12-201ENST00000450481 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
USP9YP12-201ENST00000450481 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
USP9YP12-201ENST00000450481 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
USP9YP12-201ENST00000450481 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
USP9YP12-201ENST00000450481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP9YP12-201ENST00000450481 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
USP9YP12-201ENST00000450481 KCNA4P22459 653 aa14.17□□□□□ -0.14
USP9YP12-201ENST00000450481 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
USP9YP12-201ENST00000450481 CAPN15O75808 1086 aa13.96□□□□□ -0.17
USP9YP12-201ENST00000450481 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
USP9YP12-201ENST00000450481 DSG3P32926 999 aa13.96□□□□□ -0.17
USP9YP12-201ENST00000450481 APLP2Q06481 763 aa13.72□□□□□ -0.21
USP9YP12-201ENST00000450481 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
USP9YP12-201ENST00000450481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
USP9YP12-201ENST00000450481 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
USP9YP12-201ENST00000450481 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
USP9YP12-201ENST00000450481 ABCB7O75027 752 aa13.63□□□□□ -0.23
USP9YP12-201ENST00000450481 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
USP9YP12-201ENST00000450481 POTEHQ6S545 545 aa13.55□□□□□ -0.24
USP9YP12-201ENST00000450481 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
USP9YP12-201ENST00000450481 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
USP9YP12-201ENST00000450481 POLA2Q14181 598 aa13.31□□□□□ -0.28
USP9YP12-201ENST00000450481 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
USP9YP12-201ENST00000450481 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
USP9YP12-201ENST00000450481 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
USP9YP12-201ENST00000450481 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
USP9YP12-201ENST00000450481 ZBTB22O15209 634 aa13.03□□□□□ -0.32
USP9YP12-201ENST00000450481 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
USP9YP12-201ENST00000450481 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
USP9YP12-201ENST00000450481 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
USP9YP12-201ENST00000450481 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
USP9YP12-201ENST00000450481 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
USP9YP12-201ENST00000450481 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
USP9YP12-201ENST00000450481 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
USP9YP12-201ENST00000450481 PITPNM1O00562 1244 aa12.71□□□□□ -0.37
USP9YP12-201ENST00000450481 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
USP9YP12-201ENST00000450481 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP9YP12-201ENST00000450481 FBLN2P98095 1184 aa12.64□□□□□ -0.39
USP9YP12-201ENST00000450481 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
USP9YP12-201ENST00000450481 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
USP9YP12-201ENST00000450481 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
USP9YP12-201ENST00000450481 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
USP9YP12-201ENST00000450481 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
USP9YP12-201ENST00000450481 HAX1O00165 279 aa12.51□□□□□ -0.41
USP9YP12-201ENST00000450481 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
USP9YP12-201ENST00000450481 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
USP9YP12-201ENST00000450481 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
USP9YP12-201ENST00000450481 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
USP9YP12-201ENST00000450481 EVX2Q03828 476 aa12.39□□□□□ -0.43
USP9YP12-201ENST00000450481 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
USP9YP12-201ENST00000450481 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP9YP12-201ENST00000450481 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
USP9YP12-201ENST00000450481 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
USP9YP12-201ENST00000450481 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
USP9YP12-201ENST00000450481 GABBR2O75899 941 aa12.08□□□□□ -0.48
USP9YP12-201ENST00000450481 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
USP9YP12-201ENST00000450481 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
USP9YP12-201ENST00000450481 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
USP9YP12-201ENST00000450481 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
USP9YP12-201ENST00000450481 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
USP9YP12-201ENST00000450481 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
USP9YP12-201ENST00000450481 LHX8Q68G74 356 aa11.85□□□□□ -0.51
USP9YP12-201ENST00000450481 CLCN6P51797 869 aa11.83□□□□□ -0.52
USP9YP12-201ENST00000450481 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
USP9YP12-201ENST00000450481 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
USP9YP12-201ENST00000450481 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
USP9YP12-201ENST00000450481 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
USP9YP12-201ENST00000450481 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
USP9YP12-201ENST00000450481 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
USP9YP12-201ENST00000450481 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP9YP12-201ENST00000450481 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
USP9YP12-201ENST00000450481 PROM2Q8N271 834 aa11.6□□□□□ -0.55
USP9YP12-201ENST00000450481 FKBP8Q14318 412 aa11.46□□□□□ -0.57
USP9YP12-201ENST00000450481 PELP1Q8IZL8 1130 aaKnown RBP11.46□□□□□ -0.57
USP9YP12-201ENST00000450481 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
USP9YP12-201ENST00000450481 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
USP9YP12-201ENST00000450481 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
USP9YP12-201ENST00000450481 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
USP9YP12-201ENST00000450481 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms