RNA–Protein interactions for RNA: ENST00000416190.5

LINC01440-201, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-201ENST00000416190 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
LINC01440-201ENST00000416190 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
LINC01440-201ENST00000416190 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
LINC01440-201ENST00000416190 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
LINC01440-201ENST00000416190 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
LINC01440-201ENST00000416190 FOXD1Q16676 465 aa15.25■□□□□ 0.03
LINC01440-201ENST00000416190 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
LINC01440-201ENST00000416190 ADRA2BP18089 450 aa14.88□□□□□ -0.03
LINC01440-201ENST00000416190 NISCHQ9Y2I1 1504 aa14.59□□□□□ -0.07
LINC01440-201ENST00000416190 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
LINC01440-201ENST00000416190 MSH5O43196 834 aa13.86□□□□□ -0.19
LINC01440-201ENST00000416190 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
LINC01440-201ENST00000416190 KCNA4P22459 653 aa13.83□□□□□ -0.2
LINC01440-201ENST00000416190 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
LINC01440-201ENST00000416190 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
LINC01440-201ENST00000416190 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
LINC01440-201ENST00000416190 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
LINC01440-201ENST00000416190 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
LINC01440-201ENST00000416190 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
LINC01440-201ENST00000416190 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
LINC01440-201ENST00000416190 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
LINC01440-201ENST00000416190 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
LINC01440-201ENST00000416190 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
LINC01440-201ENST00000416190 HOXD11P31277 338 aaPredicted RBP12.97□□□□□ -0.33
LINC01440-201ENST00000416190 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
LINC01440-201ENST00000416190 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
LINC01440-201ENST00000416190 ZBTB22O15209 634 aa12.79□□□□□ -0.36
LINC01440-201ENST00000416190 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
LINC01440-201ENST00000416190 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
LINC01440-201ENST00000416190 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
LINC01440-201ENST00000416190 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
LINC01440-201ENST00000416190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC01440-201ENST00000416190 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
LINC01440-201ENST00000416190 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
LINC01440-201ENST00000416190 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
LINC01440-201ENST00000416190 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
LINC01440-201ENST00000416190 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
LINC01440-201ENST00000416190 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
LINC01440-201ENST00000416190 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
LINC01440-201ENST00000416190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
LINC01440-201ENST00000416190 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
LINC01440-201ENST00000416190 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
LINC01440-201ENST00000416190 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
LINC01440-201ENST00000416190 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
LINC01440-201ENST00000416190 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
LINC01440-201ENST00000416190 SHROOM4Q9ULL8 1493 aa11.81□□□□□ -0.52
LINC01440-201ENST00000416190 NACADO15069 1562 aa11.79□□□□□ -0.52
LINC01440-201ENST00000416190 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
LINC01440-201ENST00000416190 APLP2Q06481 763 aa11.75□□□□□ -0.53
LINC01440-201ENST00000416190 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
LINC01440-201ENST00000416190 ABCC9O60706 1549 aa11.72□□□□□ -0.53
LINC01440-201ENST00000416190 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
LINC01440-201ENST00000416190 CAPN15O75808 1086 aa11.66□□□□□ -0.54
LINC01440-201ENST00000416190 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
LINC01440-201ENST00000416190 POLA2Q14181 598 aa11.57□□□□□ -0.56
LINC01440-201ENST00000416190 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
LINC01440-201ENST00000416190 FKBP8Q14318 412 aa11.55□□□□□ -0.56
LINC01440-201ENST00000416190 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
LINC01440-201ENST00000416190 ABCB7O75027 752 aa11.53□□□□□ -0.56
LINC01440-201ENST00000416190 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
LINC01440-201ENST00000416190 DSG3P32926 999 aa11.48□□□□□ -0.57
LINC01440-201ENST00000416190 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
LINC01440-201ENST00000416190 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
LINC01440-201ENST00000416190 FBLN2P98095 1184 aa11.36□□□□□ -0.59
LINC01440-201ENST00000416190 RSF1Q96T23 1441 aaPredicted RBP11.36□□□□□ -0.59
LINC01440-201ENST00000416190 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
LINC01440-201ENST00000416190 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
LINC01440-201ENST00000416190 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.61
LINC01440-201ENST00000416190 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
LINC01440-201ENST00000416190 BICRAQ9NZM4 1560 aa11.26□□□□□ -0.61
LINC01440-201ENST00000416190 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
LINC01440-201ENST00000416190 PROM2Q8N271 834 aa11.2□□□□□ -0.62
LINC01440-201ENST00000416190 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
LINC01440-201ENST00000416190 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
LINC01440-201ENST00000416190 WIZO95785 1651 aa11.15□□□□□ -0.62
LINC01440-201ENST00000416190 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
LINC01440-201ENST00000416190 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
LINC01440-201ENST00000416190 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
LINC01440-201ENST00000416190 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
LINC01440-201ENST00000416190 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
LINC01440-201ENST00000416190 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC01440-201ENST00000416190 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
LINC01440-201ENST00000416190 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
LINC01440-201ENST00000416190 SMARCA2P51531 1590 aa10.98□□□□□ -0.65
LINC01440-201ENST00000416190 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
LINC01440-201ENST00000416190 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
LINC01440-201ENST00000416190 ATAD2BQ9ULI0 1458 aa10.95□□□□□ -0.66
LINC01440-201ENST00000416190 CCDC88BA6NC98 1476 aa10.95□□□□□ -0.66
LINC01440-201ENST00000416190 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
LINC01440-201ENST00000416190 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
LINC01440-201ENST00000416190 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
LINC01440-201ENST00000416190 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
LINC01440-201ENST00000416190 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
LINC01440-201ENST00000416190 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
LINC01440-201ENST00000416190 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
LINC01440-201ENST00000416190 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
LINC01440-201ENST00000416190 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
LINC01440-201ENST00000416190 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
LINC01440-201ENST00000416190 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
LINC01440-201ENST00000416190 REM2Q8IYK8 340 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms