RNA–Protein interactions for RNA: ENST00000552063.1

AC008083.3-202, humanhuman

TSL 3 BASIC

Gene AC008083.3, Length 277 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008083.3-202ENST00000552063 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
AC008083.3-202ENST00000552063 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
AC008083.3-202ENST00000552063 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
AC008083.3-202ENST00000552063 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
AC008083.3-202ENST00000552063 FOXD1Q16676 465 aa18.31■□□□□ 0.52
AC008083.3-202ENST00000552063 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
AC008083.3-202ENST00000552063 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
AC008083.3-202ENST00000552063 MSH5O43196 834 aa17.08■□□□□ 0.32
AC008083.3-202ENST00000552063 ADRA2BP18089 450 aa17.07■□□□□ 0.32
AC008083.3-202ENST00000552063 PIAS4Q8N2W9 510 aaPredicted RBP17.07■□□□□ 0.32
AC008083.3-202ENST00000552063 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
AC008083.3-202ENST00000552063 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
AC008083.3-202ENST00000552063 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
AC008083.3-202ENST00000552063 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
AC008083.3-202ENST00000552063 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
AC008083.3-202ENST00000552063 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
AC008083.3-202ENST00000552063 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
AC008083.3-202ENST00000552063 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
AC008083.3-202ENST00000552063 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
AC008083.3-202ENST00000552063 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
AC008083.3-202ENST00000552063 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
AC008083.3-202ENST00000552063 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
AC008083.3-202ENST00000552063 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
AC008083.3-202ENST00000552063 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
AC008083.3-202ENST00000552063 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
AC008083.3-202ENST00000552063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.23□□□□□ -0.13
AC008083.3-202ENST00000552063 KCNA4P22459 653 aa14.22□□□□□ -0.13
AC008083.3-202ENST00000552063 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
AC008083.3-202ENST00000552063 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
AC008083.3-202ENST00000552063 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
AC008083.3-202ENST00000552063 CAPN15O75808 1086 aa13.71□□□□□ -0.21
AC008083.3-202ENST00000552063 DSG3P32926 999 aa13.69□□□□□ -0.22
AC008083.3-202ENST00000552063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
AC008083.3-202ENST00000552063 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
AC008083.3-202ENST00000552063 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
AC008083.3-202ENST00000552063 APLP2Q06481 763 aa13.48□□□□□ -0.25
AC008083.3-202ENST00000552063 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
AC008083.3-202ENST00000552063 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
AC008083.3-202ENST00000552063 ABCB7O75027 752 aa13.43□□□□□ -0.26
AC008083.3-202ENST00000552063 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
AC008083.3-202ENST00000552063 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
AC008083.3-202ENST00000552063 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
AC008083.3-202ENST00000552063 POLA2Q14181 598 aa13.15□□□□□ -0.3
AC008083.3-202ENST00000552063 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
AC008083.3-202ENST00000552063 ZBTB22O15209 634 aa13.12□□□□□ -0.31
AC008083.3-202ENST00000552063 POTEHQ6S545 545 aa13.11□□□□□ -0.31
AC008083.3-202ENST00000552063 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
AC008083.3-202ENST00000552063 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
AC008083.3-202ENST00000552063 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
AC008083.3-202ENST00000552063 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
AC008083.3-202ENST00000552063 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
AC008083.3-202ENST00000552063 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
AC008083.3-202ENST00000552063 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
AC008083.3-202ENST00000552063 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
AC008083.3-202ENST00000552063 FBLN2P98095 1184 aa12.51□□□□□ -0.41
AC008083.3-202ENST00000552063 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
AC008083.3-202ENST00000552063 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
AC008083.3-202ENST00000552063 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
AC008083.3-202ENST00000552063 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
AC008083.3-202ENST00000552063 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
AC008083.3-202ENST00000552063 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
AC008083.3-202ENST00000552063 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC008083.3-202ENST00000552063 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
AC008083.3-202ENST00000552063 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
AC008083.3-202ENST00000552063 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
AC008083.3-202ENST00000552063 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
AC008083.3-202ENST00000552063 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
AC008083.3-202ENST00000552063 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
AC008083.3-202ENST00000552063 HAX1O00165 279 aa12.2□□□□□ -0.46
AC008083.3-202ENST00000552063 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
AC008083.3-202ENST00000552063 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
AC008083.3-202ENST00000552063 EVX2Q03828 476 aa12.14□□□□□ -0.47
AC008083.3-202ENST00000552063 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
AC008083.3-202ENST00000552063 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
AC008083.3-202ENST00000552063 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
AC008083.3-202ENST00000552063 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
AC008083.3-202ENST00000552063 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
AC008083.3-202ENST00000552063 GABBR2O75899 941 aa11.82□□□□□ -0.52
AC008083.3-202ENST00000552063 CREBZFQ9NS37 354 aa11.77□□□□□ -0.53
AC008083.3-202ENST00000552063 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
AC008083.3-202ENST00000552063 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
AC008083.3-202ENST00000552063 PROM2Q8N271 834 aa11.64□□□□□ -0.55
AC008083.3-202ENST00000552063 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
AC008083.3-202ENST00000552063 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
AC008083.3-202ENST00000552063 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
AC008083.3-202ENST00000552063 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
AC008083.3-202ENST00000552063 CLCN6P51797 869 aa11.56□□□□□ -0.56
AC008083.3-202ENST00000552063 LHX8Q68G74 356 aa11.5□□□□□ -0.57
AC008083.3-202ENST00000552063 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
AC008083.3-202ENST00000552063 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
AC008083.3-202ENST00000552063 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
AC008083.3-202ENST00000552063 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
AC008083.3-202ENST00000552063 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
AC008083.3-202ENST00000552063 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
AC008083.3-202ENST00000552063 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
AC008083.3-202ENST00000552063 MIER1Q8N108 512 aa11.3□□□□□ -0.6
AC008083.3-202ENST00000552063 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
AC008083.3-202ENST00000552063 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
AC008083.3-202ENST00000552063 FKBP8Q14318 412 aa11.26□□□□□ -0.61
AC008083.3-202ENST00000552063 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms