RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
SYF2-202ENST00000354361 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
SYF2-202ENST00000354361 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
SYF2-202ENST00000354361 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
SYF2-202ENST00000354361 FOXD1Q16676 465 aa18.33■□□□□ 0.52
SYF2-202ENST00000354361 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
SYF2-202ENST00000354361 MSH5O43196 834 aa17.16■□□□□ 0.34
SYF2-202ENST00000354361 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
SYF2-202ENST00000354361 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
SYF2-202ENST00000354361 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SYF2-202ENST00000354361 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
SYF2-202ENST00000354361 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
SYF2-202ENST00000354361 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
SYF2-202ENST00000354361 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
SYF2-202ENST00000354361 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
SYF2-202ENST00000354361 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
SYF2-202ENST00000354361 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
SYF2-202ENST00000354361 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
SYF2-202ENST00000354361 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
SYF2-202ENST00000354361 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
SYF2-202ENST00000354361 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
SYF2-202ENST00000354361 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
SYF2-202ENST00000354361 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
SYF2-202ENST00000354361 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
SYF2-202ENST00000354361 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
SYF2-202ENST00000354361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.125e-8■■■□□ 16
SYF2-202ENST00000354361 KCNA4P22459 653 aa14.15□□□□□ -0.14
SYF2-202ENST00000354361 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
SYF2-202ENST00000354361 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
SYF2-202ENST00000354361 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
SYF2-202ENST00000354361 CAPN15O75808 1086 aa13.78□□□□□ -0.2
SYF2-202ENST00000354361 DSG3P32926 999 aa13.7□□□□□ -0.22
SYF2-202ENST00000354361 APLP2Q06481 763 aa13.57□□□□□ -0.24
SYF2-202ENST00000354361 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
SYF2-202ENST00000354361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
SYF2-202ENST00000354361 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
SYF2-202ENST00000354361 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
SYF2-202ENST00000354361 ABCB7O75027 752 aa13.48□□□□□ -0.25
SYF2-202ENST00000354361 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
SYF2-202ENST00000354361 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
SYF2-202ENST00000354361 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
SYF2-202ENST00000354361 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
SYF2-202ENST00000354361 POTEHQ6S545 545 aa13.19□□□□□ -0.3
SYF2-202ENST00000354361 POLA2Q14181 598 aa13.17□□□□□ -0.3
SYF2-202ENST00000354361 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
SYF2-202ENST00000354361 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
SYF2-202ENST00000354361 ZBTB22O15209 634 aa13.02□□□□□ -0.33
SYF2-202ENST00000354361 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
SYF2-202ENST00000354361 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
SYF2-202ENST00000354361 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
SYF2-202ENST00000354361 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
SYF2-202ENST00000354361 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
SYF2-202ENST00000354361 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
SYF2-202ENST00000354361 FBLN2P98095 1184 aa12.56□□□□□ -0.4
SYF2-202ENST00000354361 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
SYF2-202ENST00000354361 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
SYF2-202ENST00000354361 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
SYF2-202ENST00000354361 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
SYF2-202ENST00000354361 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
SYF2-202ENST00000354361 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SYF2-202ENST00000354361 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.426e-6■■■■□ 25.8
SYF2-202ENST00000354361 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
SYF2-202ENST00000354361 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
SYF2-202ENST00000354361 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
SYF2-202ENST00000354361 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
SYF2-202ENST00000354361 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
SYF2-202ENST00000354361 HAX1O00165 279 aa12.28□□□□□ -0.44
SYF2-202ENST00000354361 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
SYF2-202ENST00000354361 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
SYF2-202ENST00000354361 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
SYF2-202ENST00000354361 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
SYF2-202ENST00000354361 EVX2Q03828 476 aa12.13□□□□□ -0.47
SYF2-202ENST00000354361 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
SYF2-202ENST00000354361 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
SYF2-202ENST00000354361 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
SYF2-202ENST00000354361 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
SYF2-202ENST00000354361 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
SYF2-202ENST00000354361 GABBR2O75899 941 aa11.85□□□□□ -0.51
SYF2-202ENST00000354361 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
SYF2-202ENST00000354361 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
SYF2-202ENST00000354361 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
SYF2-202ENST00000354361 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
SYF2-202ENST00000354361 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
SYF2-202ENST00000354361 CLCN6P51797 869 aa11.61□□□□□ -0.55
SYF2-202ENST00000354361 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
SYF2-202ENST00000354361 LHX8Q68G74 356 aa11.57□□□□□ -0.56
SYF2-202ENST00000354361 PROM2Q8N271 834 aa11.55□□□□□ -0.56
SYF2-202ENST00000354361 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
SYF2-202ENST00000354361 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
SYF2-202ENST00000354361 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
SYF2-202ENST00000354361 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
SYF2-202ENST00000354361 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
SYF2-202ENST00000354361 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
SYF2-202ENST00000354361 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.6
SYF2-202ENST00000354361 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
SYF2-202ENST00000354361 MIER1Q8N108 512 aa11.31□□□□□ -0.6
SYF2-202ENST00000354361 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
SYF2-202ENST00000354361 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
SYF2-202ENST00000354361 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
SYF2-202ENST00000354361 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms