RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
LINC02040-201ENST00000481004 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
LINC02040-201ENST00000481004 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
LINC02040-201ENST00000481004 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
LINC02040-201ENST00000481004 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
LINC02040-201ENST00000481004 FOXD1Q16676 465 aa16.29■□□□□ 0.2
LINC02040-201ENST00000481004 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
LINC02040-201ENST00000481004 ADRA2BP18089 450 aa15.57■□□□□ 0.08
LINC02040-201ENST00000481004 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
LINC02040-201ENST00000481004 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
LINC02040-201ENST00000481004 MSH5O43196 834 aa15.16■□□□□ 0.02
LINC02040-201ENST00000481004 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
LINC02040-201ENST00000481004 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
LINC02040-201ENST00000481004 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
LINC02040-201ENST00000481004 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
LINC02040-201ENST00000481004 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
LINC02040-201ENST00000481004 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
LINC02040-201ENST00000481004 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
LINC02040-201ENST00000481004 KCNA4P22459 653 aa13.85□□□□□ -0.19
LINC02040-201ENST00000481004 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
LINC02040-201ENST00000481004 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
LINC02040-201ENST00000481004 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
LINC02040-201ENST00000481004 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
LINC02040-201ENST00000481004 CACNB1Q02641 598 aaPredicted RBP13.41□□□□□ -0.26
LINC02040-201ENST00000481004 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
LINC02040-201ENST00000481004 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
LINC02040-201ENST00000481004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC02040-201ENST00000481004 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
LINC02040-201ENST00000481004 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
LINC02040-201ENST00000481004 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
LINC02040-201ENST00000481004 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
LINC02040-201ENST00000481004 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
LINC02040-201ENST00000481004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
LINC02040-201ENST00000481004 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
LINC02040-201ENST00000481004 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
LINC02040-201ENST00000481004 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
LINC02040-201ENST00000481004 ZBTB22O15209 634 aa12.69□□□□□ -0.38
LINC02040-201ENST00000481004 APLP2Q06481 763 aa12.65□□□□□ -0.38
LINC02040-201ENST00000481004 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
LINC02040-201ENST00000481004 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
LINC02040-201ENST00000481004 CAPN15O75808 1086 aa12.49□□□□□ -0.41
LINC02040-201ENST00000481004 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
LINC02040-201ENST00000481004 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
LINC02040-201ENST00000481004 POTEHQ6S545 545 aa12.43□□□□□ -0.42
LINC02040-201ENST00000481004 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
LINC02040-201ENST00000481004 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
LINC02040-201ENST00000481004 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
LINC02040-201ENST00000481004 ABCC9O60706 1549 aa12.35□□□□□ -0.43
LINC02040-201ENST00000481004 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
LINC02040-201ENST00000481004 DSG3P32926 999 aa12.26□□□□□ -0.45
LINC02040-201ENST00000481004 ABCB7O75027 752 aa12.2□□□□□ -0.46
LINC02040-201ENST00000481004 POLA2Q14181 598 aa12.15□□□□□ -0.46
LINC02040-201ENST00000481004 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
LINC02040-201ENST00000481004 FBLN2P98095 1184 aa11.92□□□□□ -0.5
LINC02040-201ENST00000481004 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
LINC02040-201ENST00000481004 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
LINC02040-201ENST00000481004 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
LINC02040-201ENST00000481004 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
LINC02040-201ENST00000481004 NACADO15069 1562 aa11.71□□□□□ -0.53
LINC02040-201ENST00000481004 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
LINC02040-201ENST00000481004 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
LINC02040-201ENST00000481004 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
LINC02040-201ENST00000481004 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
LINC02040-201ENST00000481004 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
LINC02040-201ENST00000481004 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
LINC02040-201ENST00000481004 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
LINC02040-201ENST00000481004 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
LINC02040-201ENST00000481004 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
LINC02040-201ENST00000481004 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
LINC02040-201ENST00000481004 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
LINC02040-201ENST00000481004 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
LINC02040-201ENST00000481004 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
LINC02040-201ENST00000481004 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC02040-201ENST00000481004 FKBP8Q14318 412 aa11.43□□□□□ -0.58
LINC02040-201ENST00000481004 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
LINC02040-201ENST00000481004 SCRIBQ14160 1630 aa11.39□□□□□ -0.59
LINC02040-201ENST00000481004 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
LINC02040-201ENST00000481004 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
LINC02040-201ENST00000481004 PITPNM1O00562 1244 aa11.29□□□□□ -0.6
LINC02040-201ENST00000481004 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
LINC02040-201ENST00000481004 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
LINC02040-201ENST00000481004 PROM2Q8N271 834 aa11.26□□□□□ -0.61
LINC02040-201ENST00000481004 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
LINC02040-201ENST00000481004 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
LINC02040-201ENST00000481004 CC2D2AQ9P2K1 1620 aa11.19□□□□□ -0.62
LINC02040-201ENST00000481004 EIF4G1Q04637 1599 aaKnown RBP11.18□□□□□ -0.62
LINC02040-201ENST00000481004 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
LINC02040-201ENST00000481004 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
LINC02040-201ENST00000481004 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
LINC02040-201ENST00000481004 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC02040-201ENST00000481004 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
LINC02040-201ENST00000481004 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
LINC02040-201ENST00000481004 PLEKHG5O94827 1062 aa11□□□□□ -0.65
LINC02040-201ENST00000481004 CHADLQ6NUI6 762 aa10.97□□□□□ -0.65
LINC02040-201ENST00000481004 MIER1Q8N108 512 aa10.95□□□□□ -0.66
LINC02040-201ENST00000481004 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
LINC02040-201ENST00000481004 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
LINC02040-201ENST00000481004 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
LINC02040-201ENST00000481004 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
LINC02040-201ENST00000481004 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms