RNA–Protein interactions for RNA: ENST00000562268.1

AC003985.2-201, humanhuman

BASIC

Gene AC003985.2, Length 1,669 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003985.2-201ENST00000562268 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
AC003985.2-201ENST00000562268 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AC003985.2-201ENST00000562268 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
AC003985.2-201ENST00000562268 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
AC003985.2-201ENST00000562268 FOXD1Q16676 465 aa14.6□□□□□ -0.07
AC003985.2-201ENST00000562268 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
AC003985.2-201ENST00000562268 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
AC003985.2-201ENST00000562268 ADRA2BP18089 450 aa13.87□□□□□ -0.19
AC003985.2-201ENST00000562268 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
AC003985.2-201ENST00000562268 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
AC003985.2-201ENST00000562268 MSH5O43196 834 aa13.5□□□□□ -0.25
AC003985.2-201ENST00000562268 KCNA4P22459 653 aa13.37□□□□□ -0.27
AC003985.2-201ENST00000562268 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
AC003985.2-201ENST00000562268 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
AC003985.2-201ENST00000562268 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
AC003985.2-201ENST00000562268 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
AC003985.2-201ENST00000562268 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
AC003985.2-201ENST00000562268 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
AC003985.2-201ENST00000562268 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
AC003985.2-201ENST00000562268 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
AC003985.2-201ENST00000562268 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
AC003985.2-201ENST00000562268 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
AC003985.2-201ENST00000562268 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
AC003985.2-201ENST00000562268 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
AC003985.2-201ENST00000562268 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
AC003985.2-201ENST00000562268 ZBTB22O15209 634 aa12.29□□□□□ -0.44
AC003985.2-201ENST00000562268 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
AC003985.2-201ENST00000562268 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
AC003985.2-201ENST00000562268 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
AC003985.2-201ENST00000562268 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
AC003985.2-201ENST00000562268 FKBP8Q14318 412 aa11.78□□□□□ -0.52
AC003985.2-201ENST00000562268 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
AC003985.2-201ENST00000562268 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
AC003985.2-201ENST00000562268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
AC003985.2-201ENST00000562268 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.56
AC003985.2-201ENST00000562268 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
AC003985.2-201ENST00000562268 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
AC003985.2-201ENST00000562268 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
AC003985.2-201ENST00000562268 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
AC003985.2-201ENST00000562268 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
AC003985.2-201ENST00000562268 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
AC003985.2-201ENST00000562268 BCANQ96GW7 911 aa11.37□□□□□ -0.59
AC003985.2-201ENST00000562268 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
AC003985.2-201ENST00000562268 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
AC003985.2-201ENST00000562268 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
AC003985.2-201ENST00000562268 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
AC003985.2-201ENST00000562268 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
AC003985.2-201ENST00000562268 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
AC003985.2-201ENST00000562268 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
AC003985.2-201ENST00000562268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
AC003985.2-201ENST00000562268 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
AC003985.2-201ENST00000562268 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
AC003985.2-201ENST00000562268 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
AC003985.2-201ENST00000562268 CAPN15O75808 1086 aa11.06□□□□□ -0.64
AC003985.2-201ENST00000562268 APLP2Q06481 763 aa11.01□□□□□ -0.65
AC003985.2-201ENST00000562268 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
AC003985.2-201ENST00000562268 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
AC003985.2-201ENST00000562268 DSG3P32926 999 aa10.95□□□□□ -0.66
AC003985.2-201ENST00000562268 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
AC003985.2-201ENST00000562268 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
AC003985.2-201ENST00000562268 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
AC003985.2-201ENST00000562268 ABCB7O75027 752 aa10.86□□□□□ -0.67
AC003985.2-201ENST00000562268 KDM2AQ9Y2K7 1162 aa10.86□□□□□ -0.67
AC003985.2-201ENST00000562268 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
AC003985.2-201ENST00000562268 PKD2Q13563 968 aa10.82□□□□□ -0.68
AC003985.2-201ENST00000562268 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
AC003985.2-201ENST00000562268 BBXQ8WY36 941 aaPredicted RBP10.81□□□□□ -0.68
AC003985.2-201ENST00000562268 FBLN2P98095 1184 aa10.8□□□□□ -0.68
AC003985.2-201ENST00000562268 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
AC003985.2-201ENST00000562268 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
AC003985.2-201ENST00000562268 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
AC003985.2-201ENST00000562268 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
AC003985.2-201ENST00000562268 POLA2Q14181 598 aa10.75□□□□□ -0.69
AC003985.2-201ENST00000562268 ARXQ96QS3 562 aa10.75□□□□□ -0.69
AC003985.2-201ENST00000562268 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
AC003985.2-201ENST00000562268 PROM2Q8N271 834 aa10.73□□□□□ -0.69
AC003985.2-201ENST00000562268 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
AC003985.2-201ENST00000562268 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
AC003985.2-201ENST00000562268 NBR1Q14596 966 aa10.64□□□□□ -0.71
AC003985.2-201ENST00000562268 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
AC003985.2-201ENST00000562268 SPRYD3Q8NCJ5 442 aa10.63□□□□□ -0.71
AC003985.2-201ENST00000562268 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
AC003985.2-201ENST00000562268 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
AC003985.2-201ENST00000562268 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
AC003985.2-201ENST00000562268 KLHL34Q8N239 644 aa10.54□□□□□ -0.72
AC003985.2-201ENST00000562268 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
AC003985.2-201ENST00000562268 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
AC003985.2-201ENST00000562268 HOMEZQ8IX15 550 aa10.5□□□□□ -0.73
AC003985.2-201ENST00000562268 RGL2O15211 777 aa10.46□□□□□ -0.74
AC003985.2-201ENST00000562268 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
AC003985.2-201ENST00000562268 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
AC003985.2-201ENST00000562268 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
AC003985.2-201ENST00000562268 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
AC003985.2-201ENST00000562268 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
AC003985.2-201ENST00000562268 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
AC003985.2-201ENST00000562268 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
AC003985.2-201ENST00000562268 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
AC003985.2-201ENST00000562268 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
AC003985.2-201ENST00000562268 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
AC003985.2-201ENST00000562268 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms