Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CCT8P1-201ENST00000413611 1657 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ADGRF5P2-201ENST00000423199 1659 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SP140L-202ENST00000396563 2397 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ACTN3-201ENST00000502692 3084 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01055-201ENST00000435067 1721 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 EPB41L2-218ENST00000527659 2436 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL031283.2-201ENST00000428747 3105 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MRPS17P1-201ENST00000596009 3130 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 TRIM59-201ENST00000309784 3867 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SEC14L1-227ENST00000591437 2828 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RARS-201ENST00000231572 2146 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL354674.1-201ENST00000585222 1780 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CHIAP2-204ENST00000532686 1449 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 FMN1-201ENST00000320930 3930 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LILRB5-201ENST00000316219 3236 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ALOXE3-203ENST00000448843 3203 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 L3MBTL3-204ENST00000526019 3243 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC093627.7-201ENST00000567533 3208 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 FHAD1-202ENST00000358897 5090 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC024257.3-201ENST00000595310 3645 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AC139713.2-214ENST00000642059 1811 ntBASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ZSCAN31-214ENST00000446474 2562 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 NTM-221ENST00000539799 2550 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LRRC37A3-201ENST00000319651 5537 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 CDH1-214ENST00000621016 3304 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AC004877.1-201ENST00000608963 4093 ntBASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 DDX19A-201ENST00000302243 2997 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNRD1ASP-219ENST00000448093 2296 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 SOX13-210ENST00000618875 3476 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AC010329.2-201ENST00000595195 2737 ntBASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 KIF5A-201ENST00000286452 3527 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02099-201ENST00000517491 2791 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MMS19-201ENST00000327238 3165 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-4Q9BYR3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms