Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CCDC7Q96M83 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CCDC7Q96M83 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC7Q96M83 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8□□□□□ -1.13
CCDC7Q96M83 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 NPM1P4-201ENST00000414095 812 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8□□□□□ -1.13
CCDC7Q96M83 AC007394.1-201ENST00000421941 531 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 AC126120.1-201ENST00000431082 470 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 RPL32P33-201ENST00000487023 394 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8□□□□□ -1.13
CCDC7Q96M83 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8□□□□□ -1.13
CCDC7Q96M83 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8□□□□□ -1.13
CCDC7Q96M83 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 MIR4505-201ENST00000582238 73 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 AC079395.2-201ENST00000610982 737 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 AL035661.1-201ENST00000620459 1144 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 MIR6730-201ENST00000622213 67 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 AL161901.1-201ENST00000624954 3425 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 AC006206.1-201ENST00000544842 3387 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
CCDC7Q96M83 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CCDC7Q96M83 AC138907.8-201ENST00000623981 2256 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 AL731532.1-201ENST00000623972 4236 ntBASIC8□□□□□ -1.13
CCDC7Q96M83 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8□□□□□ -1.13
CCDC7Q96M83 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 AC117409.1-201ENST00000470499 1310 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 HMGB1P20-201ENST00000402555 677 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 OR2AT2P-201ENST00000413438 905 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 NIFKP3-201ENST00000417799 865 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 DUTP7-201ENST00000507982 486 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 OR7A1P-201ENST00000601206 970 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 FAM27E4-201ENST00000605259 342 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 AC007842.1-201ENST00000597336 2039 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 AL158152.1-201ENST00000602652 1435 ntBASIC7.99□□□□□ -1.13
CCDC7Q96M83 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC7Q96M83 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
CCDC7Q96M83 RNA5SP30-201ENST00000365552 115 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 AL596448.1-201ENST00000415024 392 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 NENFP1-201ENST00000419476 466 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 AC108693.1-201ENST00000496068 432 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 RN7SL544P-201ENST00000617232 284 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 RN7SL763P-201ENST00000620922 284 ntBASIC7.98□□□□□ -1.13
CCDC7Q96M83 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CCDC7Q96M83 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC7Q96M83 RNA5SP394-201ENST00000364216 119 ntBASIC7.97□□□□□ -1.13
CCDC7Q96M83 NME1P1-201ENST00000420914 382 ntBASIC7.97□□□□□ -1.13
CCDC7Q96M83 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.97□□□□□ -1.13
CCDC7Q96M83 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.97□□□□□ -1.13
CCDC7Q96M83 RPS23P9-201ENST00000448848 438 ntBASIC7.97□□□□□ -1.13
CCDC7Q96M83 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.97□□□□□ -1.13
CCDC7Q96M83 RNU1-88P-201ENST00000459274 128 ntBASIC7.97□□□□□ -1.13
CCDC7Q96M83 SIAH1P1-201ENST00000479411 923 ntBASIC7.97□□□□□ -1.13
CCDC7Q96M83 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.97□□□□□ -1.13
CCDC7Q96M83 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.97□□□□□ -1.13
CCDC7Q96M83 AC021146.10-201ENST00000515628 706 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms