RNA–Protein interactions for RNA: ENST00000605259.1

FAM27E4-201, Transcript of family with sequence similarity 27 member E4, humanhuman

BASIC

Gene FAM27E4, Length 342 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E4-201ENST00000605259 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
FAM27E4-201ENST00000605259 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
FAM27E4-201ENST00000605259 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
FAM27E4-201ENST00000605259 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
FAM27E4-201ENST00000605259 FOXD1Q16676 465 aa14.26□□□□□ -0.13
FAM27E4-201ENST00000605259 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
FAM27E4-201ENST00000605259 MSH5O43196 834 aa13.56□□□□□ -0.24
FAM27E4-201ENST00000605259 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
FAM27E4-201ENST00000605259 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
FAM27E4-201ENST00000605259 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
FAM27E4-201ENST00000605259 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
FAM27E4-201ENST00000605259 ADRA2BP18089 450 aa13.11□□□□□ -0.31
FAM27E4-201ENST00000605259 CCDC180Q9P1Z9 1646 aa12.42□□□□□ -0.42
FAM27E4-201ENST00000605259 ABCC9O60706 1549 aa12.3□□□□□ -0.44
FAM27E4-201ENST00000605259 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
FAM27E4-201ENST00000605259 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
FAM27E4-201ENST00000605259 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
FAM27E4-201ENST00000605259 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
FAM27E4-201ENST00000605259 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
FAM27E4-201ENST00000605259 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
FAM27E4-201ENST00000605259 NACADO15069 1562 aa11.71□□□□□ -0.54
FAM27E4-201ENST00000605259 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
FAM27E4-201ENST00000605259 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
FAM27E4-201ENST00000605259 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
FAM27E4-201ENST00000605259 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
FAM27E4-201ENST00000605259 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
FAM27E4-201ENST00000605259 MYO15BQ96JP2 1530 aa11.52□□□□□ -0.57
FAM27E4-201ENST00000605259 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
FAM27E4-201ENST00000605259 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
FAM27E4-201ENST00000605259 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
FAM27E4-201ENST00000605259 RNF39Q9H2S5 420 aa11.47□□□□□ -0.57
FAM27E4-201ENST00000605259 UNC13AQ9UPW8 1703 aa11.46□□□□□ -0.57
FAM27E4-201ENST00000605259 SCRIBQ14160 1630 aa11.43□□□□□ -0.58
FAM27E4-201ENST00000605259 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
FAM27E4-201ENST00000605259 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
FAM27E4-201ENST00000605259 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
FAM27E4-201ENST00000605259 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
FAM27E4-201ENST00000605259 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
FAM27E4-201ENST00000605259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.63
FAM27E4-201ENST00000605259 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
FAM27E4-201ENST00000605259 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
FAM27E4-201ENST00000605259 CECR2Q9BXF3 1484 aa11.03□□□□□ -0.64
FAM27E4-201ENST00000605259 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
FAM27E4-201ENST00000605259 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
FAM27E4-201ENST00000605259 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
FAM27E4-201ENST00000605259 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
FAM27E4-201ENST00000605259 ATAD2BQ9ULI0 1458 aa10.79□□□□□ -0.68
FAM27E4-201ENST00000605259 BAZ1BQ9UIG0 1483 aaKnown RBP10.78□□□□□ -0.68
FAM27E4-201ENST00000605259 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
FAM27E4-201ENST00000605259 MROH2BQ7Z745 1585 aa10.77□□□□□ -0.69
FAM27E4-201ENST00000605259 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
FAM27E4-201ENST00000605259 CAPN15O75808 1086 aa10.74□□□□□ -0.69
FAM27E4-201ENST00000605259 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
FAM27E4-201ENST00000605259 WIZO95785 1651 aa10.69□□□□□ -0.7
FAM27E4-201ENST00000605259 DSG3P32926 999 aa10.67□□□□□ -0.7
FAM27E4-201ENST00000605259 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
FAM27E4-201ENST00000605259 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
FAM27E4-201ENST00000605259 APLP2Q06481 763 aa10.65□□□□□ -0.7
FAM27E4-201ENST00000605259 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
FAM27E4-201ENST00000605259 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
FAM27E4-201ENST00000605259 NESP48681 1621 aa10.58□□□□□ -0.72
FAM27E4-201ENST00000605259 KCNA4P22459 653 aa10.58□□□□□ -0.72
FAM27E4-201ENST00000605259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
FAM27E4-201ENST00000605259 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
FAM27E4-201ENST00000605259 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
FAM27E4-201ENST00000605259 TOP2AP11388 1531 aaKnown RBP10.54□□□□□ -0.72
FAM27E4-201ENST00000605259 POTEHQ6S545 545 aa10.54□□□□□ -0.72
FAM27E4-201ENST00000605259 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
FAM27E4-201ENST00000605259 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
FAM27E4-201ENST00000605259 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
FAM27E4-201ENST00000605259 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
FAM27E4-201ENST00000605259 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
FAM27E4-201ENST00000605259 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
FAM27E4-201ENST00000605259 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
FAM27E4-201ENST00000605259 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
FAM27E4-201ENST00000605259 CUX2O14529 1486 aa10.44□□□□□ -0.74
FAM27E4-201ENST00000605259 CCDC88BA6NC98 1476 aa10.43□□□□□ -0.74
FAM27E4-201ENST00000605259 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
FAM27E4-201ENST00000605259 ABCB7O75027 752 aa10.41□□□□□ -0.74
FAM27E4-201ENST00000605259 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
FAM27E4-201ENST00000605259 CFTRP13569 1480 aa10.39□□□□□ -0.75
FAM27E4-201ENST00000605259 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
FAM27E4-201ENST00000605259 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
FAM27E4-201ENST00000605259 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
FAM27E4-201ENST00000605259 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
FAM27E4-201ENST00000605259 WDR62O43379 1518 aa10.29□□□□□ -0.76
FAM27E4-201ENST00000605259 URB2Q14146 1524 aaKnown RBP10.26□□□□□ -0.77
FAM27E4-201ENST00000605259 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
FAM27E4-201ENST00000605259 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
FAM27E4-201ENST00000605259 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
FAM27E4-201ENST00000605259 DNMBPQ6XZF7 1577 aa10.2□□□□□ -0.78
FAM27E4-201ENST00000605259 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
FAM27E4-201ENST00000605259 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
FAM27E4-201ENST00000605259 POLA2Q14181 598 aa10.16□□□□□ -0.78
FAM27E4-201ENST00000605259 FBLN2P98095 1184 aa10.14□□□□□ -0.79
FAM27E4-201ENST00000605259 SOGA1O94964 1423 aa10.14□□□□□ -0.79
FAM27E4-201ENST00000605259 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
FAM27E4-201ENST00000605259 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
FAM27E4-201ENST00000605259 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
FAM27E4-201ENST00000605259 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms