Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 TMC3-AS1-206ENST00000612811 2726 ntBASIC5.79□□□□□ -1.48
CASP6P55212 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 RN7SKP78-201ENST00000364711 318 ntBASIC5.79□□□□□ -1.48
CASP6P55212 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 MIR199B-201ENST00000384849 110 ntBASIC5.79□□□□□ -1.48
CASP6P55212 RPL5P20-201ENST00000403848 896 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AL035422.1-201ENST00000414193 397 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 RPSAP65-201ENST00000429660 595 ntBASIC5.79□□□□□ -1.48
CASP6P55212 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 RPS29P14-201ENST00000431518 171 ntBASIC5.79□□□□□ -1.48
CASP6P55212 NDUFA5P10-201ENST00000432147 357 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 AC023512.1-201ENST00000444513 499 ntBASIC5.79□□□□□ -1.48
CASP6P55212 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 CYCSP53-201ENST00000455540 265 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AC021205.1-201ENST00000468797 348 ntBASIC5.79□□□□□ -1.48
CASP6P55212 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 AC117395.1-201ENST00000487390 403 ntBASIC5.79□□□□□ -1.48
CASP6P55212 RPL12P30-201ENST00000488389 499 ntBASIC5.79□□□□□ -1.48
CASP6P55212 RBBP4P1-201ENST00000502424 1276 ntBASIC5.79□□□□□ -1.48
CASP6P55212 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CASP6P55212 AC093815.1-201ENST00000508637 280 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AC011411.1-201ENST00000509592 876 ntBASIC5.79□□□□□ -1.48
CASP6P55212 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 OR8X1P-201ENST00000534542 869 ntBASIC5.79□□□□□ -1.48
CASP6P55212 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.79□□□□□ -1.48
CASP6P55212 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CASP6P55212 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 AL356986.1-201ENST00000604085 341 ntBASIC5.79□□□□□ -1.48
CASP6P55212 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 AC074140.1-201ENST00000621617 208 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AP000577.1-201ENST00000624366 878 ntBASIC5.79□□□□□ -1.48
CASP6P55212 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.79□□□□□ -1.48
CASP6P55212 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CASP6P55212 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CASP6P55212 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CASP6P55212 AC083843.2-201ENST00000568248 6253 ntBASIC5.78□□□□□ -1.48
CASP6P55212 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CASP6P55212 EIF3EP1-201ENST00000433978 1316 ntBASIC5.78□□□□□ -1.48
CASP6P55212 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP6P55212 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CASP6P55212 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 SNORD16-201ENST00000362803 99 ntBASIC5.78□□□□□ -1.48
CASP6P55212 RNA5SP188-201ENST00000362916 129 ntBASIC5.78□□□□□ -1.48
CASP6P55212 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.78□□□□□ -1.48
CASP6P55212 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.78□□□□□ -1.48
CASP6P55212 MIR541-201ENST00000401360 84 ntBASIC5.78□□□□□ -1.48
CASP6P55212 MIR1204-201ENST00000408388 67 ntBASIC5.78□□□□□ -1.48
CASP6P55212 AC096537.2-201ENST00000413707 714 ntBASIC5.78□□□□□ -1.48
CASP6P55212 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.78□□□□□ -1.48
CASP6P55212 AC022206.1-201ENST00000495947 347 ntBASIC5.78□□□□□ -1.48
CASP6P55212 LSM3P4-201ENST00000502948 309 ntBASIC5.78□□□□□ -1.48
CASP6P55212 ASNSP4-201ENST00000511103 447 ntBASIC5.78□□□□□ -1.48
CASP6P55212 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 AL133399.1-201ENST00000527476 298 ntBASIC5.78□□□□□ -1.48
CASP6P55212 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP6P55212 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP6P55212 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.78□□□□□ -1.48
CASP6P55212 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP6P55212 AC092375.1-201ENST00000550410 637 ntBASIC5.78□□□□□ -1.48
CASP6P55212 RACGAP1P-201ENST00000550663 1879 ntBASIC5.78□□□□□ -1.48
CASP6P55212 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.78□□□□□ -1.48
CASP6P55212 AL591767.3-201ENST00000554632 525 ntBASIC5.78□□□□□ -1.48
CASP6P55212 AC023158.1-201ENST00000561632 1025 ntBASIC5.78□□□□□ -1.48
CASP6P55212 AC008507.3-201ENST00000585753 472 ntBASIC5.78□□□□□ -1.48
CASP6P55212 AC008521.2-201ENST00000591021 259 ntBASIC5.78□□□□□ -1.48
CASP6P55212 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms