Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC068790.7-201ENST00000602347 528 ntBASIC7.12□□□□□ -1.27
RGPD3A6NKT7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 AC110597.1-201ENST00000562669 3176 ntBASIC7.12□□□□□ -1.27
RGPD3A6NKT7 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
RGPD3A6NKT7 COL6A4P1-202ENST00000487147 4317 ntBASIC7.12□□□□□ -1.27
RGPD3A6NKT7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 SNORA51.8-201ENST00000384234 132 ntBASIC7.11□□□□□ -1.27
RGPD3A6NKT7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 AC079922.1-201ENST00000443291 359 ntBASIC7.11□□□□□ -1.27
RGPD3A6NKT7 AC139697.1-201ENST00000548429 745 ntBASIC7.11□□□□□ -1.27
RGPD3A6NKT7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 MIR4270-201ENST00000581799 70 ntBASIC7.11□□□□□ -1.27
RGPD3A6NKT7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 AL157831.2-201ENST00000564681 3095 ntBASIC7.11□□□□□ -1.27
RGPD3A6NKT7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RGPD3A6NKT7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 RN7SL481P-201ENST00000477764 299 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC004980.4-201ENST00000513375 203 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 IGLV3-24-201ENST00000517477 197 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 EDDM3DP-201ENST00000554692 434 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC119674.1-213ENST00000641177 1386 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CASC19-221ENST00000641309 1382 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 SNORA16A-201ENST00000384342 137 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC008072.1-201ENST00000434254 824 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 RN7SL352P-201ENST00000466002 277 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 HMGB1P44-201ENST00000508597 572 ntBASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.1□□□□□ -1.27
RGPD3A6NKT7 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RGPD3A6NKT7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RGPD3A6NKT7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RGPD3A6NKT7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms