RNA–Protein interactions for RNA: ENST00000411857.2

HNRNPA1P54-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 54, humanhuman

BASIC

Gene HNRNPA1P54, Length 9,714 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P54-201ENST00000411857 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
HNRNPA1P54-201ENST00000411857 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
HNRNPA1P54-201ENST00000411857 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
HNRNPA1P54-201ENST00000411857 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
HNRNPA1P54-201ENST00000411857 APLP2Q06481 763 aa12.2□□□□□ -0.46
HNRNPA1P54-201ENST00000411857 NISCHQ9Y2I1 1504 aa12.07□□□□□ -0.48
HNRNPA1P54-201ENST00000411857 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
HNRNPA1P54-201ENST00000411857 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
HNRNPA1P54-201ENST00000411857 SHROOM4Q9ULL8 1493 aa12.03□□□□□ -0.48
HNRNPA1P54-201ENST00000411857 ERICH6Q7L0X2 663 aa12.03□□□□□ -0.48
HNRNPA1P54-201ENST00000411857 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
HNRNPA1P54-201ENST00000411857 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
HNRNPA1P54-201ENST00000411857 NEFLP07196 543 aa11.7□□□□□ -0.54
HNRNPA1P54-201ENST00000411857 TTBK1Q5TCY1 1321 aaPredicted RBP11.69□□□□□ -0.54
HNRNPA1P54-201ENST00000411857 MYT1Q01538 1121 aa11.68□□□□□ -0.54
HNRNPA1P54-201ENST00000411857 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
HNRNPA1P54-201ENST00000411857 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
HNRNPA1P54-201ENST00000411857 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
HNRNPA1P54-201ENST00000411857 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
HNRNPA1P54-201ENST00000411857 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
HNRNPA1P54-201ENST00000411857 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
HNRNPA1P54-201ENST00000411857 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
HNRNPA1P54-201ENST00000411857 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
HNRNPA1P54-201ENST00000411857 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
HNRNPA1P54-201ENST00000411857 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
HNRNPA1P54-201ENST00000411857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
HNRNPA1P54-201ENST00000411857 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
HNRNPA1P54-201ENST00000411857 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
HNRNPA1P54-201ENST00000411857 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.62
HNRNPA1P54-201ENST00000411857 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
HNRNPA1P54-201ENST00000411857 TRIM26Q12899 539 aaPredicted RBP11.11□□□□□ -0.63
HNRNPA1P54-201ENST00000411857 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
HNRNPA1P54-201ENST00000411857 ITGAEP38570 1179 aa11.08□□□□□ -0.64
HNRNPA1P54-201ENST00000411857 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
HNRNPA1P54-201ENST00000411857 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.65
HNRNPA1P54-201ENST00000411857 CNGB1Q14028 1251 aaPredicted RBP10.98□□□□□ -0.65
HNRNPA1P54-201ENST00000411857 HRCP23327 699 aa10.94□□□□□ -0.66
HNRNPA1P54-201ENST00000411857 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
HNRNPA1P54-201ENST00000411857 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
HNRNPA1P54-201ENST00000411857 NEFMP07197 916 aa10.85□□□□□ -0.67
HNRNPA1P54-201ENST00000411857 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
HNRNPA1P54-201ENST00000411857 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
HNRNPA1P54-201ENST00000411857 DIEXFQ68CQ4 756 aaKnown RBP10.81□□□□□ -0.68
HNRNPA1P54-201ENST00000411857 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
HNRNPA1P54-201ENST00000411857 ANP32CO43423 234 aa10.79□□□□□ -0.68
HNRNPA1P54-201ENST00000411857 BCANQ96GW7 911 aa10.75□□□□□ -0.69
HNRNPA1P54-201ENST00000411857 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
HNRNPA1P54-201ENST00000411857 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
HNRNPA1P54-201ENST00000411857 NEUROD1Q13562 356 aa10.72□□□□□ -0.69
HNRNPA1P54-201ENST00000411857 ANP32AP39687 249 aaKnown RBP10.7□□□□□ -0.7
HNRNPA1P54-201ENST00000411857 BCL11AQ9H165 835 aa10.68□□□□□ -0.7
HNRNPA1P54-201ENST00000411857 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
HNRNPA1P54-201ENST00000411857 HSP90AA1P07900 732 aaKnown RBP10.64□□□□□ -0.71
HNRNPA1P54-201ENST00000411857 ESF1Q9H501 851 aaKnown RBP10.62□□□□□ -0.71
HNRNPA1P54-201ENST00000411857 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
HNRNPA1P54-201ENST00000411857 FBLN2P98095 1184 aa10.59□□□□□ -0.71
HNRNPA1P54-201ENST00000411857 GLIPR1L2Q4G1C9 344 aa10.57□□□□□ -0.72
HNRNPA1P54-201ENST00000411857 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
HNRNPA1P54-201ENST00000411857 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
HNRNPA1P54-201ENST00000411857 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
HNRNPA1P54-201ENST00000411857 NPM2Q86SE8 214 aaKnown RBP10.52□□□□□ -0.73
HNRNPA1P54-201ENST00000411857 ABCC9O60706 1549 aa10.49□□□□□ -0.73
HNRNPA1P54-201ENST00000411857 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 EIF5BO60841 1220 aaKnown RBP10.44□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.44□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 TONSLQ96HA7 1378 aa10.44□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
HNRNPA1P54-201ENST00000411857 CHGAP10645 457 aaKnown RBP10.39□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 SCRIBQ14160 1630 aa10.37□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 PLPPR3Q6T4P5 718 aa10.35□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 NCLP19338 710 aaKnown RBP10.34□□□□□ -0.75
HNRNPA1P54-201ENST00000411857 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 FKBP8Q14318 412 aa10.31□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 BECN1Q14457 450 aa10.31□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 CCDC136Q96JN2 1154 aa10.31□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 HNRNPUQ00839 825 aaKnown RBP eCLIP10.31□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 ANP32EQ9BTT0 268 aa10.3□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 A0A0G2JS52 829 aa10.3□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 GOLGA6L22H0YM25 854 aa10.28□□□□□ -0.76
HNRNPA1P54-201ENST00000411857 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 ARXQ96QS3 562 aa10.26□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 NBR1Q14596 966 aa10.26□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 TRIM44Q96DX7 344 aaPredicted RBP10.26□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 CCDC180Q9P1Z9 1646 aa10.25□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 CSRNP3Q8WYN3 585 aa10.23□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 GOLGA6L6A8MZA4 724 aa10.22□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 C14orf37Q86TY3 774 aa10.22□□□□□ -0.77
HNRNPA1P54-201ENST00000411857 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms