RNA–Protein interactions for RNA: ENST00000396231.6

EFCAB6-203, Transcript of EF-hand calcium binding domain 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EFCAB6, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-203ENST00000396231 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
EFCAB6-203ENST00000396231 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
EFCAB6-203ENST00000396231 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
EFCAB6-203ENST00000396231 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
EFCAB6-203ENST00000396231 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
EFCAB6-203ENST00000396231 HRCP23327 699 aa12.4□□□□□ -0.42
EFCAB6-203ENST00000396231 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
EFCAB6-203ENST00000396231 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
EFCAB6-203ENST00000396231 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
EFCAB6-203ENST00000396231 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
EFCAB6-203ENST00000396231 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
EFCAB6-203ENST00000396231 TRIM26Q12899 539 aaPredicted RBP12.12□□□□□ -0.47
EFCAB6-203ENST00000396231 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
EFCAB6-203ENST00000396231 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.47
EFCAB6-203ENST00000396231 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
EFCAB6-203ENST00000396231 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
EFCAB6-203ENST00000396231 LOC105371045A0A1W2PR82 267 aa12.01□□□□□ -0.49
EFCAB6-203ENST00000396231 MYT1Q01538 1121 aa11.98□□□□□ -0.49
EFCAB6-203ENST00000396231 TTBK1Q5TCY1 1321 aaPredicted RBP11.93□□□□□ -0.5
EFCAB6-203ENST00000396231 APLP2Q06481 763 aa11.87□□□□□ -0.51
EFCAB6-203ENST00000396231 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
EFCAB6-203ENST00000396231 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
EFCAB6-203ENST00000396231 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
EFCAB6-203ENST00000396231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
EFCAB6-203ENST00000396231 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
EFCAB6-203ENST00000396231 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
EFCAB6-203ENST00000396231 GTF3C3Q9Y5Q9 886 aa11.59□□□□□ -0.55
EFCAB6-203ENST00000396231 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
EFCAB6-203ENST00000396231 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
EFCAB6-203ENST00000396231 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
EFCAB6-203ENST00000396231 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
EFCAB6-203ENST00000396231 NEFLP07196 543 aa11.49□□□□□ -0.57
EFCAB6-203ENST00000396231 SCAF1Q9H7N4 1312 aaKnown RBP11.48□□□□□ -0.57
EFCAB6-203ENST00000396231 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
EFCAB6-203ENST00000396231 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
EFCAB6-203ENST00000396231 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
EFCAB6-203ENST00000396231 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
EFCAB6-203ENST00000396231 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
EFCAB6-203ENST00000396231 ITGAEP38570 1179 aa11.28□□□□□ -0.6
EFCAB6-203ENST00000396231 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
EFCAB6-203ENST00000396231 ABCC9O60706 1549 aa11.19□□□□□ -0.62
EFCAB6-203ENST00000396231 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
EFCAB6-203ENST00000396231 BCANQ96GW7 911 aa11.17□□□□□ -0.62
EFCAB6-203ENST00000396231 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
EFCAB6-203ENST00000396231 RSF1Q96T23 1441 aaPredicted RBP11.13□□□□□ -0.63
EFCAB6-203ENST00000396231 MIER1Q8N108 512 aa11.12□□□□□ -0.63
EFCAB6-203ENST00000396231 ANP32CO43423 234 aa11.05□□□□□ -0.64
EFCAB6-203ENST00000396231 FAM50AQ14320 339 aaKnown RBP11.03□□□□□ -0.64
EFCAB6-203ENST00000396231 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
EFCAB6-203ENST00000396231 CEP162Q5TB80 1403 aa11□□□□□ -0.65
EFCAB6-203ENST00000396231 FKBP8Q14318 412 aa11□□□□□ -0.65
EFCAB6-203ENST00000396231 RTL5Q5HYW3 569 aaPredicted RBP10.97□□□□□ -0.65
EFCAB6-203ENST00000396231 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
EFCAB6-203ENST00000396231 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
EFCAB6-203ENST00000396231 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
EFCAB6-203ENST00000396231 EEA1Q15075 1411 aa10.93□□□□□ -0.66
EFCAB6-203ENST00000396231 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
EFCAB6-203ENST00000396231 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
EFCAB6-203ENST00000396231 CLIP1P30622 1438 aa10.91□□□□□ -0.66
EFCAB6-203ENST00000396231 DDX10Q13206 875 aaKnown RBP10.91□□□□□ -0.66
EFCAB6-203ENST00000396231 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
EFCAB6-203ENST00000396231 ANP32EQ9BTT0 268 aa10.89□□□□□ -0.67
EFCAB6-203ENST00000396231 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
EFCAB6-203ENST00000396231 SUPT16HQ9Y5B9 1047 aaKnown RBP10.87□□□□□ -0.67
EFCAB6-203ENST00000396231 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
EFCAB6-203ENST00000396231 NACADO15069 1562 aa10.84□□□□□ -0.67
EFCAB6-203ENST00000396231 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
EFCAB6-203ENST00000396231 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
EFCAB6-203ENST00000396231 CECR2Q9BXF3 1484 aa10.8□□□□□ -0.68
EFCAB6-203ENST00000396231 TONSLQ96HA7 1378 aa10.8□□□□□ -0.68
EFCAB6-203ENST00000396231 CEP164Q9UPV0 1460 aa10.78□□□□□ -0.68
EFCAB6-203ENST00000396231 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
EFCAB6-203ENST00000396231 WRNQ14191 1432 aaPredicted RBP eCLIP10.77□□□□□ -0.69
EFCAB6-203ENST00000396231 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
EFCAB6-203ENST00000396231 SOGA1O94964 1423 aa10.77□□□□□ -0.69
EFCAB6-203ENST00000396231 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
EFCAB6-203ENST00000396231 MROH2BQ7Z745 1585 aa10.72□□□□□ -0.69
EFCAB6-203ENST00000396231 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
EFCAB6-203ENST00000396231 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
EFCAB6-203ENST00000396231 IRX6P78412 446 aaPredicted RBP10.7□□□□□ -0.7
EFCAB6-203ENST00000396231 FAM9BQ8IZU0 186 aa10.7□□□□□ -0.7
EFCAB6-203ENST00000396231 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
EFCAB6-203ENST00000396231 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
EFCAB6-203ENST00000396231 VPS8Q8N3P4 1428 aa10.69□□□□□ -0.7
EFCAB6-203ENST00000396231 BCL11AQ9H165 835 aa10.68□□□□□ -0.7
EFCAB6-203ENST00000396231 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
EFCAB6-203ENST00000396231 NBR1Q14596 966 aa10.66□□□□□ -0.7
EFCAB6-203ENST00000396231 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
EFCAB6-203ENST00000396231 CCDC136Q96JN2 1154 aa10.64□□□□□ -0.71
EFCAB6-203ENST00000396231 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
EFCAB6-203ENST00000396231 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
EFCAB6-203ENST00000396231 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
EFCAB6-203ENST00000396231 CCNB3Q8WWL7 1395 aa10.63□□□□□ -0.71
EFCAB6-203ENST00000396231 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
EFCAB6-203ENST00000396231 WIZO95785 1651 aa10.6□□□□□ -0.71
EFCAB6-203ENST00000396231 CCER2I3L3R5 266 aa10.6□□□□□ -0.71
EFCAB6-203ENST00000396231 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
EFCAB6-203ENST00000396231 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
EFCAB6-203ENST00000396231 PPP4R2Q9NY27 417 aa10.57□□□□□ -0.72
EFCAB6-203ENST00000396231 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms