RNA–Protein interactions for RNA: ENST00000472091.1

ERVFRD-1-201, Transcript of endogenous retrovirus group FRD member 1, envelope, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERVFRD-1, Length 3,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-1-201ENST00000472091 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
ERVFRD-1-201ENST00000472091 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
ERVFRD-1-201ENST00000472091 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
ERVFRD-1-201ENST00000472091 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
ERVFRD-1-201ENST00000472091 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
ERVFRD-1-201ENST00000472091 HRCP23327 699 aa12.15□□□□□ -0.46
ERVFRD-1-201ENST00000472091 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
ERVFRD-1-201ENST00000472091 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
ERVFRD-1-201ENST00000472091 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
ERVFRD-1-201ENST00000472091 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
ERVFRD-1-201ENST00000472091 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
ERVFRD-1-201ENST00000472091 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
ERVFRD-1-201ENST00000472091 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
ERVFRD-1-201ENST00000472091 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
ERVFRD-1-201ENST00000472091 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
ERVFRD-1-201ENST00000472091 TTBK1Q5TCY1 1321 aaPredicted RBP11.34□□□□□ -0.59
ERVFRD-1-201ENST00000472091 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
ERVFRD-1-201ENST00000472091 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
ERVFRD-1-201ENST00000472091 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
ERVFRD-1-201ENST00000472091 DCAF1Q9Y4B6 1507 aa11.32□□□□□ -0.6
ERVFRD-1-201ENST00000472091 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
ERVFRD-1-201ENST00000472091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
ERVFRD-1-201ENST00000472091 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
ERVFRD-1-201ENST00000472091 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
ERVFRD-1-201ENST00000472091 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
ERVFRD-1-201ENST00000472091 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
ERVFRD-1-201ENST00000472091 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
ERVFRD-1-201ENST00000472091 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
ERVFRD-1-201ENST00000472091 ZCCHC6Q5VYS8 1495 aaKnown RBP11.14□□□□□ -0.63
ERVFRD-1-201ENST00000472091 CCDC180Q9P1Z9 1646 aa11.13□□□□□ -0.63
ERVFRD-1-201ENST00000472091 MYT1Q01538 1121 aa11.03□□□□□ -0.64
ERVFRD-1-201ENST00000472091 MIER1Q8N108 512 aa10.89□□□□□ -0.67
ERVFRD-1-201ENST00000472091 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
ERVFRD-1-201ENST00000472091 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
ERVFRD-1-201ENST00000472091 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
ERVFRD-1-201ENST00000472091 UBTFP17480 764 aaKnown RBP10.75□□□□□ -0.69
ERVFRD-1-201ENST00000472091 BCANQ96GW7 911 aa10.74□□□□□ -0.69
ERVFRD-1-201ENST00000472091 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
ERVFRD-1-201ENST00000472091 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
ERVFRD-1-201ENST00000472091 SUPT16HQ9Y5B9 1047 aaKnown RBP10.65□□□□□ -0.71
ERVFRD-1-201ENST00000472091 BCL11AQ9H165 835 aa10.63□□□□□ -0.71
ERVFRD-1-201ENST00000472091 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
ERVFRD-1-201ENST00000472091 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
ERVFRD-1-201ENST00000472091 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
ERVFRD-1-201ENST00000472091 ANP32EQ9BTT0 268 aa10.59□□□□□ -0.71
ERVFRD-1-201ENST00000472091 ABCC9O60706 1549 aa10.55□□□□□ -0.72
ERVFRD-1-201ENST00000472091 APLP2Q06481 763 aa10.55□□□□□ -0.72
ERVFRD-1-201ENST00000472091 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
ERVFRD-1-201ENST00000472091 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
ERVFRD-1-201ENST00000472091 CEP162Q5TB80 1403 aa10.53□□□□□ -0.72
ERVFRD-1-201ENST00000472091 ITGAEP38570 1179 aa10.53□□□□□ -0.72
ERVFRD-1-201ENST00000472091 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.73
ERVFRD-1-201ENST00000472091 FKBP8Q14318 412 aa10.51□□□□□ -0.73
ERVFRD-1-201ENST00000472091 SOGA1O94964 1423 aa10.48□□□□□ -0.73
ERVFRD-1-201ENST00000472091 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
ERVFRD-1-201ENST00000472091 ABCC8Q09428 1581 aa10.44□□□□□ -0.74
ERVFRD-1-201ENST00000472091 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
ERVFRD-1-201ENST00000472091 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
ERVFRD-1-201ENST00000472091 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
ERVFRD-1-201ENST00000472091 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
ERVFRD-1-201ENST00000472091 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
ERVFRD-1-201ENST00000472091 DDX10Q13206 875 aaKnown RBP10.39□□□□□ -0.75
ERVFRD-1-201ENST00000472091 NEFLP07196 543 aa10.38□□□□□ -0.75
ERVFRD-1-201ENST00000472091 IRX6P78412 446 aaPredicted RBP10.38□□□□□ -0.75
ERVFRD-1-201ENST00000472091 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
ERVFRD-1-201ENST00000472091 WIZO95785 1651 aa10.37□□□□□ -0.75
ERVFRD-1-201ENST00000472091 ERICH6Q7L0X2 663 aa10.37□□□□□ -0.75
ERVFRD-1-201ENST00000472091 TNIKQ9UKE5 1360 aa10.37□□□□□ -0.75
ERVFRD-1-201ENST00000472091 WRNQ14191 1432 aaPredicted RBP eCLIP10.36□□□□□ -0.75
ERVFRD-1-201ENST00000472091 CLSPNQ9HAW4 1339 aa10.29□□□□□ -0.76
ERVFRD-1-201ENST00000472091 CLIP1P30622 1438 aa10.28□□□□□ -0.76
ERVFRD-1-201ENST00000472091 MSH5O43196 834 aa10.27□□□□□ -0.77
ERVFRD-1-201ENST00000472091 KANK4Q5T7N3 995 aaPredicted RBP10.27□□□□□ -0.77
ERVFRD-1-201ENST00000472091 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
ERVFRD-1-201ENST00000472091 SIN3AQ96ST3 1273 aa10.25□□□□□ -0.77
ERVFRD-1-201ENST00000472091 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
ERVFRD-1-201ENST00000472091 CNGB1Q14028 1251 aaPredicted RBP10.24□□□□□ -0.77
ERVFRD-1-201ENST00000472091 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
ERVFRD-1-201ENST00000472091 NBR1Q14596 966 aa10.22□□□□□ -0.77
ERVFRD-1-201ENST00000472091 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
ERVFRD-1-201ENST00000472091 CDK11AQ9UQ88 783 aaPredicted RBP10.19□□□□□ -0.78
ERVFRD-1-201ENST00000472091 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
ERVFRD-1-201ENST00000472091 ANP32CO43423 234 aa10.18□□□□□ -0.78
ERVFRD-1-201ENST00000472091 FAM50AQ14320 339 aaKnown RBP10.18□□□□□ -0.78
ERVFRD-1-201ENST00000472091 HNRNPUQ00839 825 aaKnown RBP eCLIP10.17□□□□□ -0.78
ERVFRD-1-201ENST00000472091 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
ERVFRD-1-201ENST00000472091 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
ERVFRD-1-201ENST00000472091 DEKP35659 375 aaKnown RBP10.14□□□□□ -0.79
ERVFRD-1-201ENST00000472091 RAPGEF2Q9Y4G8 1499 aa10.12□□□□□ -0.79
ERVFRD-1-201ENST00000472091 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
ERVFRD-1-201ENST00000472091 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
ERVFRD-1-201ENST00000472091 EEA1Q15075 1411 aa10.1□□□□□ -0.79
ERVFRD-1-201ENST00000472091 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
ERVFRD-1-201ENST00000472091 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
ERVFRD-1-201ENST00000472091 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
ERVFRD-1-201ENST00000472091 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
ERVFRD-1-201ENST00000472091 FAM9BQ8IZU0 186 aa10.07□□□□□ -0.8
ERVFRD-1-201ENST00000472091 RAB3GAP2Q9H2M9 1393 aa10.07□□□□□ -0.8
ERVFRD-1-201ENST00000472091 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
ERVFRD-1-201ENST00000472091 EIF4G1Q04637 1599 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms