Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AP001893.2-201ENST00000526949 202 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AP001994.1-201ENST00000527539 826 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AK6P1-201ENST00000540219 478 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 OR6C73P-201ENST00000546432 358 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 HMGB1P33-201ENST00000563485 527 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC125494.2-201ENST00000602431 657 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AL009028.1-201ENST00000604895 802 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC103710.1-201ENST00000610003 901 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AL133351.5-201ENST00000612789 106 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC027807.2-201ENST00000616099 408 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC136475.10-201ENST00000620253 385 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 AC114546.4-201ENST00000624413 369 ntBASIC7.65□□□□□ -1.18
PCDHB11Q9Y5F2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.65□□□□□ -1.19
PCDHB11Q9Y5F2 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC104083.1-201ENST00000569449 2615 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RNU6-433P-201ENST00000363216 104 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RNU5E-5P-201ENST00000365379 116 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC069157.1-201ENST00000421749 137 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 GAPDHP73-201ENST00000423411 1007 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 IGLV3-4-201ENST00000432300 244 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 SNX18P9-201ENST00000440580 835 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AL831737.1-201ENST00000441288 271 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RN7SL282P-201ENST00000479676 297 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 IMPA1P1-201ENST00000510718 842 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 RNA5SP75-201ENST00000516841 111 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AP003385.2-201ENST00000524910 973 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AP000435.1-201ENST00000528539 496 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ULK4P2-202ENST00000564187 492 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 TAS2R6P-201ENST00000605022 826 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHB11Q9Y5F2 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms