RNA–Protein interactions for RNA: ENST00000520068.5

LINC02055-203, Transcript of long intergenic non-protein coding RNA 2055, humanhuman

TSL 2 BASIC

Gene LINC02055, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02055-203ENST00000520068 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
LINC02055-203ENST00000520068 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
LINC02055-203ENST00000520068 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
LINC02055-203ENST00000520068 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
LINC02055-203ENST00000520068 FOXD1Q16676 465 aa18.3■□□□□ 0.52
LINC02055-203ENST00000520068 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
LINC02055-203ENST00000520068 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
LINC02055-203ENST00000520068 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
LINC02055-203ENST00000520068 ADRA2BP18089 450 aa17.2■□□□□ 0.34
LINC02055-203ENST00000520068 MSH5O43196 834 aa17.18■□□□□ 0.34
LINC02055-203ENST00000520068 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
LINC02055-203ENST00000520068 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
LINC02055-203ENST00000520068 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
LINC02055-203ENST00000520068 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
LINC02055-203ENST00000520068 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
LINC02055-203ENST00000520068 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
LINC02055-203ENST00000520068 ABCC9O60706 1549 aa15.39■□□□□ 0.05
LINC02055-203ENST00000520068 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
LINC02055-203ENST00000520068 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
LINC02055-203ENST00000520068 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
LINC02055-203ENST00000520068 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
LINC02055-203ENST00000520068 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
LINC02055-203ENST00000520068 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
LINC02055-203ENST00000520068 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
LINC02055-203ENST00000520068 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
LINC02055-203ENST00000520068 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
LINC02055-203ENST00000520068 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
LINC02055-203ENST00000520068 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
LINC02055-203ENST00000520068 KCNA4P22459 653 aa14.62□□□□□ -0.07
LINC02055-203ENST00000520068 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
LINC02055-203ENST00000520068 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
LINC02055-203ENST00000520068 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
LINC02055-203ENST00000520068 NACADO15069 1562 aa14.26□□□□□ -0.13
LINC02055-203ENST00000520068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC02055-203ENST00000520068 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
LINC02055-203ENST00000520068 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC02055-203ENST00000520068 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
LINC02055-203ENST00000520068 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
LINC02055-203ENST00000520068 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
LINC02055-203ENST00000520068 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
LINC02055-203ENST00000520068 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
LINC02055-203ENST00000520068 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
LINC02055-203ENST00000520068 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
LINC02055-203ENST00000520068 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
LINC02055-203ENST00000520068 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
LINC02055-203ENST00000520068 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
LINC02055-203ENST00000520068 CUX2O14529 1486 aa13.79□□□□□ -0.2
LINC02055-203ENST00000520068 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
LINC02055-203ENST00000520068 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
LINC02055-203ENST00000520068 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
LINC02055-203ENST00000520068 CAPN15O75808 1086 aa13.72□□□□□ -0.21
LINC02055-203ENST00000520068 DSG3P32926 999 aa13.68□□□□□ -0.22
LINC02055-203ENST00000520068 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
LINC02055-203ENST00000520068 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
LINC02055-203ENST00000520068 ZBTB22O15209 634 aa13.53□□□□□ -0.24
LINC02055-203ENST00000520068 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
LINC02055-203ENST00000520068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
LINC02055-203ENST00000520068 ABCB7O75027 752 aa13.51□□□□□ -0.25
LINC02055-203ENST00000520068 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
LINC02055-203ENST00000520068 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
LINC02055-203ENST00000520068 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
LINC02055-203ENST00000520068 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
LINC02055-203ENST00000520068 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
LINC02055-203ENST00000520068 POTEHQ6S545 545 aa13.44□□□□□ -0.26
LINC02055-203ENST00000520068 APLP2Q06481 763 aa13.43□□□□□ -0.26
LINC02055-203ENST00000520068 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
LINC02055-203ENST00000520068 POLA2Q14181 598 aa13.25□□□□□ -0.29
LINC02055-203ENST00000520068 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
LINC02055-203ENST00000520068 BAZ1AQ9NRL2 1556 aaPredicted RBP13.14□□□□□ -0.31
LINC02055-203ENST00000520068 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
LINC02055-203ENST00000520068 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
LINC02055-203ENST00000520068 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
LINC02055-203ENST00000520068 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
LINC02055-203ENST00000520068 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
LINC02055-203ENST00000520068 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
LINC02055-203ENST00000520068 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
LINC02055-203ENST00000520068 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
LINC02055-203ENST00000520068 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
LINC02055-203ENST00000520068 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
LINC02055-203ENST00000520068 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
LINC02055-203ENST00000520068 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
LINC02055-203ENST00000520068 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
LINC02055-203ENST00000520068 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
LINC02055-203ENST00000520068 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
LINC02055-203ENST00000520068 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
LINC02055-203ENST00000520068 NESP48681 1621 aa12.88□□□□□ -0.35
LINC02055-203ENST00000520068 WIZO95785 1651 aa12.86□□□□□ -0.35
LINC02055-203ENST00000520068 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
LINC02055-203ENST00000520068 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
LINC02055-203ENST00000520068 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
LINC02055-203ENST00000520068 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
LINC02055-203ENST00000520068 PDS5BQ9NTI5 1447 aa12.81□□□□□ -0.36
LINC02055-203ENST00000520068 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
LINC02055-203ENST00000520068 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
LINC02055-203ENST00000520068 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
LINC02055-203ENST00000520068 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
LINC02055-203ENST00000520068 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
LINC02055-203ENST00000520068 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
LINC02055-203ENST00000520068 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
LINC02055-203ENST00000520068 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms