Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 AL109809.4-201ENST00000603520 2185 ntBASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 UBTFL11-201ENST00000428234 2252 ntBASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 MAPK10-313ENST00000641405 2469 ntBASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 AC016582.1-202ENST00000636341 2982 ntBASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRTAP4-3Q9BYR4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL591848.3-201ENST00000570141 2968 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 MAPK10-329ENST00000641555 2656 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL035555.1-201ENST00000404462 1790 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 MTCO1P14-201ENST00000441695 1559 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL137003.2-201ENST00000606924 2538 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC091152.4-201ENST00000623480 3483 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LST1-211ENST00000376110 433 ntTSL 3 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC117470.1-201ENST00000381974 330 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-877P-201ENST00000383868 107 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 Y_RNA.395-201ENST00000383945 109 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 SNORA22C-201ENST00000384614 134 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-796P-201ENST00000391086 107 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 PCNPP3-201ENST00000393579 471 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL109918.1-202ENST00000406724 436 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-248P-201ENST00000410720 107 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP140-201ENST00000411196 284 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AP000275.1-201ENST00000411943 390 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL157698.1-201ENST00000415190 1011 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ARL5AP1-201ENST00000418991 388 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC098592.1-201ENST00000419352 333 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms