RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
PCNPP3-201ENST00000393579 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
PCNPP3-201ENST00000393579 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
PCNPP3-201ENST00000393579 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
PCNPP3-201ENST00000393579 FOXD1Q16676 465 aa15.38■□□□□ 0.05
PCNPP3-201ENST00000393579 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
PCNPP3-201ENST00000393579 MSH5O43196 834 aa14.63□□□□□ -0.07
PCNPP3-201ENST00000393579 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
PCNPP3-201ENST00000393579 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
PCNPP3-201ENST00000393579 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
PCNPP3-201ENST00000393579 ADRA2BP18089 450 aa13.97□□□□□ -0.17
PCNPP3-201ENST00000393579 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
PCNPP3-201ENST00000393579 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
PCNPP3-201ENST00000393579 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
PCNPP3-201ENST00000393579 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
PCNPP3-201ENST00000393579 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
PCNPP3-201ENST00000393579 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
PCNPP3-201ENST00000393579 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
PCNPP3-201ENST00000393579 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
PCNPP3-201ENST00000393579 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
PCNPP3-201ENST00000393579 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
PCNPP3-201ENST00000393579 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
PCNPP3-201ENST00000393579 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
PCNPP3-201ENST00000393579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
PCNPP3-201ENST00000393579 POTEHQ6S545 545 aa11.76□□□□□ -0.53
PCNPP3-201ENST00000393579 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
PCNPP3-201ENST00000393579 CAPN15O75808 1086 aa11.52□□□□□ -0.57
PCNPP3-201ENST00000393579 DSG3P32926 999 aa11.45□□□□□ -0.58
PCNPP3-201ENST00000393579 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
PCNPP3-201ENST00000393579 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
PCNPP3-201ENST00000393579 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
PCNPP3-201ENST00000393579 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
PCNPP3-201ENST00000393579 ABCB7O75027 752 aa11.21□□□□□ -0.61
PCNPP3-201ENST00000393579 APLP2Q06481 763 aa11.12□□□□□ -0.63
PCNPP3-201ENST00000393579 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
PCNPP3-201ENST00000393579 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
PCNPP3-201ENST00000393579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.97□□□□□ -0.65
PCNPP3-201ENST00000393579 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
PCNPP3-201ENST00000393579 HNRNPUL2Q1KMD3 747 aaKnown RBP10.97□□□□□ -0.65
PCNPP3-201ENST00000393579 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
PCNPP3-201ENST00000393579 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
PCNPP3-201ENST00000393579 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
PCNPP3-201ENST00000393579 KCNA4P22459 653 aa10.76□□□□□ -0.69
PCNPP3-201ENST00000393579 POLA2Q14181 598 aa10.75□□□□□ -0.69
PCNPP3-201ENST00000393579 AKT1S1Q96B36 256 aa10.6□□□□□ -0.71
PCNPP3-201ENST00000393579 HAX1O00165 279 aa10.58□□□□□ -0.72
PCNPP3-201ENST00000393579 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
PCNPP3-201ENST00000393579 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
PCNPP3-201ENST00000393579 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
PCNPP3-201ENST00000393579 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
PCNPP3-201ENST00000393579 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
PCNPP3-201ENST00000393579 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
PCNPP3-201ENST00000393579 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCNPP3-201ENST00000393579 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
PCNPP3-201ENST00000393579 EVX2Q03828 476 aa10.3□□□□□ -0.76
PCNPP3-201ENST00000393579 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
PCNPP3-201ENST00000393579 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
PCNPP3-201ENST00000393579 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
PCNPP3-201ENST00000393579 LHX8Q68G74 356 aa10.13□□□□□ -0.79
PCNPP3-201ENST00000393579 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
PCNPP3-201ENST00000393579 SPDYE2BA6NHP3 402 aa10.08□□□□□ -0.8
PCNPP3-201ENST00000393579 SPDYE6P0CI01 402 aa10.08□□□□□ -0.8
PCNPP3-201ENST00000393579 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
PCNPP3-201ENST00000393579 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
PCNPP3-201ENST00000393579 GABBR2O75899 941 aa10.07□□□□□ -0.8
PCNPP3-201ENST00000393579 FBLN2P98095 1184 aa10.07□□□□□ -0.8
PCNPP3-201ENST00000393579 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
PCNPP3-201ENST00000393579 PLSCR2Q9NRY7 297 aa10.03□□□□□ -0.8
PCNPP3-201ENST00000393579 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
PCNPP3-201ENST00000393579 ZNF692Q9BU19 519 aaPredicted RBP9.96□□□□□ -0.82
PCNPP3-201ENST00000393579 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
PCNPP3-201ENST00000393579 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
PCNPP3-201ENST00000393579 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
PCNPP3-201ENST00000393579 ZBTB22O15209 634 aa9.84□□□□□ -0.83
PCNPP3-201ENST00000393579 CD44P16070 742 aaKnown RBP9.84□□□□□ -0.83
PCNPP3-201ENST00000393579 MKRN4PQ13434 485 aaPredicted RBP9.81□□□□□ -0.84
PCNPP3-201ENST00000393579 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
PCNPP3-201ENST00000393579 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
PCNPP3-201ENST00000393579 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
PCNPP3-201ENST00000393579 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
PCNPP3-201ENST00000393579 CLCN6P51797 869 aa9.69□□□□□ -0.86
PCNPP3-201ENST00000393579 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
PCNPP3-201ENST00000393579 POTEMA6NI47 508 aa9.59□□□□□ -0.87
PCNPP3-201ENST00000393579 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
PCNPP3-201ENST00000393579 OTUD5Q96G74 571 aa9.57□□□□□ -0.88
PCNPP3-201ENST00000393579 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
PCNPP3-201ENST00000393579 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
PCNPP3-201ENST00000393579 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
PCNPP3-201ENST00000393579 POTEB2H3BUK9 544 aa9.48□□□□□ -0.89
PCNPP3-201ENST00000393579 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
PCNPP3-201ENST00000393579 CREBZFQ9NS37 354 aa9.44□□□□□ -0.9
PCNPP3-201ENST00000393579 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
PCNPP3-201ENST00000393579 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
PCNPP3-201ENST00000393579 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
PCNPP3-201ENST00000393579 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
PCNPP3-201ENST00000393579 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
PCNPP3-201ENST00000393579 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCNPP3-201ENST00000393579 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
PCNPP3-201ENST00000393579 SLC39A7Q92504 469 aa9.31□□□□□ -0.92
PCNPP3-201ENST00000393579 C7P10643 843 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms