RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
RNU6-248P-201ENST00000410720 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
RNU6-248P-201ENST00000410720 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
RNU6-248P-201ENST00000410720 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
RNU6-248P-201ENST00000410720 FOXD1Q16676 465 aa17■□□□□ 0.31
RNU6-248P-201ENST00000410720 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
RNU6-248P-201ENST00000410720 ADRA2BP18089 450 aa16.02■□□□□ 0.16
RNU6-248P-201ENST00000410720 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
RNU6-248P-201ENST00000410720 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
RNU6-248P-201ENST00000410720 MSH5O43196 834 aa15.83■□□□□ 0.12
RNU6-248P-201ENST00000410720 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
RNU6-248P-201ENST00000410720 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
RNU6-248P-201ENST00000410720 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
RNU6-248P-201ENST00000410720 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
RNU6-248P-201ENST00000410720 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
RNU6-248P-201ENST00000410720 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
RNU6-248P-201ENST00000410720 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
RNU6-248P-201ENST00000410720 KCNA4P22459 653 aa14.22□□□□□ -0.13
RNU6-248P-201ENST00000410720 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
RNU6-248P-201ENST00000410720 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
RNU6-248P-201ENST00000410720 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
RNU6-248P-201ENST00000410720 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
RNU6-248P-201ENST00000410720 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
RNU6-248P-201ENST00000410720 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
RNU6-248P-201ENST00000410720 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
RNU6-248P-201ENST00000410720 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
RNU6-248P-201ENST00000410720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNU6-248P-201ENST00000410720 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
RNU6-248P-201ENST00000410720 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
RNU6-248P-201ENST00000410720 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
RNU6-248P-201ENST00000410720 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
RNU6-248P-201ENST00000410720 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
RNU6-248P-201ENST00000410720 ZBTB22O15209 634 aa13.06□□□□□ -0.32
RNU6-248P-201ENST00000410720 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
RNU6-248P-201ENST00000410720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
RNU6-248P-201ENST00000410720 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
RNU6-248P-201ENST00000410720 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
RNU6-248P-201ENST00000410720 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
RNU6-248P-201ENST00000410720 CAPN15O75808 1086 aa12.85□□□□□ -0.35
RNU6-248P-201ENST00000410720 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
RNU6-248P-201ENST00000410720 APLP2Q06481 763 aa12.82□□□□□ -0.36
RNU6-248P-201ENST00000410720 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
RNU6-248P-201ENST00000410720 DSG3P32926 999 aa12.71□□□□□ -0.37
RNU6-248P-201ENST00000410720 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
RNU6-248P-201ENST00000410720 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
RNU6-248P-201ENST00000410720 ABCB7O75027 752 aa12.6□□□□□ -0.39
RNU6-248P-201ENST00000410720 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
RNU6-248P-201ENST00000410720 POLA2Q14181 598 aa12.48□□□□□ -0.41
RNU6-248P-201ENST00000410720 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
RNU6-248P-201ENST00000410720 FBLN2P98095 1184 aa12.17□□□□□ -0.46
RNU6-248P-201ENST00000410720 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
RNU6-248P-201ENST00000410720 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
RNU6-248P-201ENST00000410720 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
RNU6-248P-201ENST00000410720 POTEHQ6S545 545 aa12.01□□□□□ -0.49
RNU6-248P-201ENST00000410720 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
RNU6-248P-201ENST00000410720 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
RNU6-248P-201ENST00000410720 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
RNU6-248P-201ENST00000410720 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
RNU6-248P-201ENST00000410720 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
RNU6-248P-201ENST00000410720 CHRDL2Q6WN34 429 aa11.82□□□□□ -0.52
RNU6-248P-201ENST00000410720 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
RNU6-248P-201ENST00000410720 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
RNU6-248P-201ENST00000410720 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
RNU6-248P-201ENST00000410720 FKBP8Q14318 412 aa11.72□□□□□ -0.53
RNU6-248P-201ENST00000410720 PABPN1Q86U42 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
RNU6-248P-201ENST00000410720 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
RNU6-248P-201ENST00000410720 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
RNU6-248P-201ENST00000410720 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
RNU6-248P-201ENST00000410720 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
RNU6-248P-201ENST00000410720 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
RNU6-248P-201ENST00000410720 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
RNU6-248P-201ENST00000410720 PROM2Q8N271 834 aa11.45□□□□□ -0.58
RNU6-248P-201ENST00000410720 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
RNU6-248P-201ENST00000410720 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
RNU6-248P-201ENST00000410720 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
RNU6-248P-201ENST00000410720 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
RNU6-248P-201ENST00000410720 HAX1O00165 279 aa11.3□□□□□ -0.6
RNU6-248P-201ENST00000410720 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
RNU6-248P-201ENST00000410720 MIER1Q8N108 512 aa11.24□□□□□ -0.61
RNU6-248P-201ENST00000410720 EVX2Q03828 476 aa11.22□□□□□ -0.61
RNU6-248P-201ENST00000410720 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
RNU6-248P-201ENST00000410720 CREBZFQ9NS37 354 aa11.22□□□□□ -0.61
RNU6-248P-201ENST00000410720 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
RNU6-248P-201ENST00000410720 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
RNU6-248P-201ENST00000410720 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
RNU6-248P-201ENST00000410720 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
RNU6-248P-201ENST00000410720 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
RNU6-248P-201ENST00000410720 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNU6-248P-201ENST00000410720 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
RNU6-248P-201ENST00000410720 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
RNU6-248P-201ENST00000410720 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
RNU6-248P-201ENST00000410720 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
RNU6-248P-201ENST00000410720 GABBR2O75899 941 aa10.95□□□□□ -0.66
RNU6-248P-201ENST00000410720 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
RNU6-248P-201ENST00000410720 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
RNU6-248P-201ENST00000410720 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
RNU6-248P-201ENST00000410720 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
RNU6-248P-201ENST00000410720 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
RNU6-248P-201ENST00000410720 NUBP1P53384 320 aa10.87□□□□□ -0.67
RNU6-248P-201ENST00000410720 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms