RNA–Protein interactions for RNA: ENST00000298171.6

TSHR-201, Transcript of thyroid stimulating hormone receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSHR, Length 4,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSHR-201ENST00000298171 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
TSHR-201ENST00000298171 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
TSHR-201ENST00000298171 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
TSHR-201ENST00000298171 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
TSHR-201ENST00000298171 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
TSHR-201ENST00000298171 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.39
TSHR-201ENST00000298171 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
TSHR-201ENST00000298171 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
TSHR-201ENST00000298171 RANGAP1P46060 587 aaPredicted RBP12.36□□□□□ -0.43
TSHR-201ENST00000298171 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
TSHR-201ENST00000298171 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
TSHR-201ENST00000298171 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
TSHR-201ENST00000298171 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
TSHR-201ENST00000298171 CCER1Q8TC90 406 aaPredicted RBP11.92□□□□□ -0.5
TSHR-201ENST00000298171 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
TSHR-201ENST00000298171 APLP2Q06481 763 aa11.88□□□□□ -0.51
TSHR-201ENST00000298171 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
TSHR-201ENST00000298171 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
TSHR-201ENST00000298171 ITGAEP38570 1179 aa11.74□□□□□ -0.53
TSHR-201ENST00000298171 HRCP23327 699 aa11.72□□□□□ -0.53
TSHR-201ENST00000298171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
TSHR-201ENST00000298171 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
TSHR-201ENST00000298171 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
TSHR-201ENST00000298171 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
TSHR-201ENST00000298171 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
TSHR-201ENST00000298171 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
TSHR-201ENST00000298171 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
TSHR-201ENST00000298171 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
TSHR-201ENST00000298171 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
TSHR-201ENST00000298171 MYT1Q01538 1121 aa11.44□□□□□ -0.58
TSHR-201ENST00000298171 ABCC9O60706 1549 aa11.38□□□□□ -0.59
TSHR-201ENST00000298171 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
TSHR-201ENST00000298171 BCANQ96GW7 911 aa11.3□□□□□ -0.6
TSHR-201ENST00000298171 ARID3CA6NKF2 412 aa11.28□□□□□ -0.6
TSHR-201ENST00000298171 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
TSHR-201ENST00000298171 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
TSHR-201ENST00000298171 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
TSHR-201ENST00000298171 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
TSHR-201ENST00000298171 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.61
TSHR-201ENST00000298171 NEFLP07196 543 aa11.2□□□□□ -0.62
TSHR-201ENST00000298171 MYO15BQ96JP2 1530 aa11.16□□□□□ -0.62
TSHR-201ENST00000298171 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.63
TSHR-201ENST00000298171 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
TSHR-201ENST00000298171 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
TSHR-201ENST00000298171 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
TSHR-201ENST00000298171 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
TSHR-201ENST00000298171 FBLN2P98095 1184 aa11.02□□□□□ -0.65
TSHR-201ENST00000298171 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
TSHR-201ENST00000298171 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
TSHR-201ENST00000298171 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
TSHR-201ENST00000298171 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
TSHR-201ENST00000298171 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
TSHR-201ENST00000298171 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
TSHR-201ENST00000298171 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
TSHR-201ENST00000298171 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
TSHR-201ENST00000298171 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
TSHR-201ENST00000298171 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
TSHR-201ENST00000298171 MIER1Q8N108 512 aa10.88□□□□□ -0.67
TSHR-201ENST00000298171 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
TSHR-201ENST00000298171 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
TSHR-201ENST00000298171 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
TSHR-201ENST00000298171 CCDC180Q9P1Z9 1646 aa10.81□□□□□ -0.68
TSHR-201ENST00000298171 FKBP8Q14318 412 aa10.8□□□□□ -0.68
TSHR-201ENST00000298171 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
TSHR-201ENST00000298171 ANP32CO43423 234 aa10.78□□□□□ -0.68
TSHR-201ENST00000298171 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
TSHR-201ENST00000298171 CLSPNQ9HAW4 1339 aa10.76□□□□□ -0.69
TSHR-201ENST00000298171 NPM2Q86SE8 214 aaKnown RBP10.73□□□□□ -0.69
TSHR-201ENST00000298171 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
TSHR-201ENST00000298171 HNRNPUQ00839 825 aaKnown RBP eCLIP10.72□□□□□ -0.69
TSHR-201ENST00000298171 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
TSHR-201ENST00000298171 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
TSHR-201ENST00000298171 RSF1Q96T23 1441 aaPredicted RBP10.68□□□□□ -0.7
TSHR-201ENST00000298171 KDM2AQ9Y2K7 1162 aa10.67□□□□□ -0.7
TSHR-201ENST00000298171 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
TSHR-201ENST00000298171 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
TSHR-201ENST00000298171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.7
TSHR-201ENST00000298171 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
TSHR-201ENST00000298171 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
TSHR-201ENST00000298171 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
TSHR-201ENST00000298171 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
TSHR-201ENST00000298171 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
TSHR-201ENST00000298171 NBR1Q14596 966 aa10.59□□□□□ -0.71
TSHR-201ENST00000298171 TONSLQ96HA7 1378 aa10.58□□□□□ -0.72
TSHR-201ENST00000298171 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
TSHR-201ENST00000298171 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
TSHR-201ENST00000298171 CLIP1P30622 1438 aa10.57□□□□□ -0.72
TSHR-201ENST00000298171 SOGA1O94964 1423 aa10.56□□□□□ -0.72
TSHR-201ENST00000298171 ARXQ96QS3 562 aa10.56□□□□□ -0.72
TSHR-201ENST00000298171 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
TSHR-201ENST00000298171 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
TSHR-201ENST00000298171 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
TSHR-201ENST00000298171 FOXD1Q16676 465 aa10.51□□□□□ -0.73
TSHR-201ENST00000298171 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
TSHR-201ENST00000298171 CANXP27824 592 aaKnown RBP10.5□□□□□ -0.73
TSHR-201ENST00000298171 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
TSHR-201ENST00000298171 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.73
TSHR-201ENST00000298171 ABCC8Q09428 1581 aa10.46□□□□□ -0.74
TSHR-201ENST00000298171 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
TSHR-201ENST00000298171 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms